YNL162W-A (YNL162W-A)

Gene profile

Gene name: YNL162W-A
Reference locus (S288C): YNL162W-A
Gene biotype: protein_coding

Description: Uncharacterized protein YNL162W-A; Putative protein of unknown function; identified by homology

Top 10 interactors (score): MCM4 (0.429)

Homologues (species, bitscore): Unknown

External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser

Comparative analysis of strains

Search table

strain assembly application macro_region gene_coord geneID rnaID protID %id %cov_exon status copyNumber copyID nORFs match_ref_CDS validORF missing_startCodon missing_stopCodon outOfFrame_stopCodon
AKU4011 GCA_001738255.1 Sake Asia CM005308.1:324059-324277:+ gene-YNL162W-A_AKU4011 rna-NM_001184490.1_AKU4011 cds-NP_076906.1_AKU4011 98.6 100.0 Verified 1 1 1 False True False False False
BG1 GCA_001932575.1 Bioethanol South America MSHP01000155.1:228023-228241:+ gene-YNL162W-A_BG1 rna-NM_001184490.1_BG1 cds-NP_076906.1_BG1 98.6 100.0 Verified 1 1 1 False True False False False
Bruggeman GCA_001738585.1 Bread Not Applicable CM005516.1:334115-334333:+ gene-YNL162W-A_Bruggeman rna-NM_001184490.1_Bruggeman cds-NP_076906.1_Bruggeman 98.6 100.0 Verified 1 1 1 False True False False False
CAT1 GCA_001738705.1 Bioethanol South America CM005532.1:376992-377210:+ gene-YNL162W-A_CAT1 rna-NM_001184490.1_CAT1 cds-NP_076906.1_CAT1 98.6 100.0 Verified 1 1 1 False True False False False
CBS1585 GCA_001738375.1 Sake Asia CM005372.1:324711-324929:+ gene-YNL162W-A_CBS1585 rna-NM_001184490.1_CBS1585 cds-NP_076906.1_CBS1585 99.0 100.0 Verified 1 1 1 False True False False False
CBS436 GCA_001738355.1 Sake Asia CM005356.1:393030-393248:+ gene-YNL162W-A_CBS436 rna-NM_001184490.1_CBS436 cds-NP_076906.1_CBS436 98.6 100.0 Mismatch 1 1 1 False True False False False
CBS6412 GCA_001738345.1 Sake Asia CM005340.1:320116-320334:+ gene-YNL162W-A_CBS6412 rna-NM_001184490.1_CBS6412 cds-NP_076906.1_CBS6412 99.0 100.0 Mismatch 1 1 1 False True False False False
CBS6413 GCA_001738265.1 Sake Asia CM005324.1:321144-321362:+ gene-YNL162W-A_CBS6413 rna-NM_001184490.1_CBS6413 cds-NP_076906.1_CBS6413 99.0 100.0 Verified 1 1 1 False True False False False
CENPK1137D GCA_000269885.1 Laboratory Not Applicable CM001535.1:324143-324361:+ gene-YNL162W-A_CENPK1137D rna-NM_001184490.1_CENPK1137D cds-NP_076906.1_CENPK1137D 100.0 100.0 Verified 1 1 1 True True False False False
EthanolRed GCA_001738615.1 Bioethanol Asia CM005484.1:321032-321250:+ gene-YNL162W-A_EthanolRed rna-NM_001184490.1_EthanolRed cds-NP_076906.1_EthanolRed 99.0 100.0 Verified 1 1 1 False True False False False
FaliES1 GCA_001738715.1 Bioethanol Asia CM005548.1:316945-317163:+ gene-YNL162W-A_FaliES1 rna-NM_001184490.1_FaliES1 cds-NP_076906.1_FaliES1 99.0 100.0 Verified 1 1 1 False True False False False
JAY291 GCA_000182315.2 Bioethanol South America ACFL01000260.1:1337-1555:- gene-YNL162W-A_JAY291 rna-NM_001184490.1_JAY291 cds-NP_076906.1_JAY291 98.6 100.0 Verified 1 1 1 False True False False False
MUCL30387 GCA_001738515.1 Bread Europe CM005420.1:329935-330153:+ gene-YNL162W-A_MUCL30387 rna-NM_001184490.1_MUCL30387 cds-NP_076906.1_MUCL30387 98.6 100.0 Verified 1 1 1 False True False False False
MUCL30388 GCA_001738495.1 Bread Europe CM005452.1:364489-364707:+ gene-YNL162W-A_MUCL30388 rna-NM_001184490.1_MUCL30388 cds-NP_076906.1_MUCL30388 98.6 100.0 Verified 1 1 1 False True False False False
MUCL39482 GCA_001738235.1 Sake Asia CM005292.1:321950-322168:+ gene-YNL162W-A_MUCL39482 rna-NM_001184490.1_MUCL39482 cds-NP_076906.1_MUCL39482 99.0 100.0 Verified 1 1 1 False True False False False
MUCL42920 GCA_001738485.1 Bread Europe CM005436.1:324353-324571:+ gene-YNL162W-A_MUCL42920 rna-NM_001184490.1_MUCL42920 cds-NP_076906.1_MUCL42920 98.6 100.0 Verified 1 1 1 False True False False False
NCIM3186 GCA_001029075.1 Bioethanol Asia CP011823.1:330298-330516:+ gene-YNL162W-A_NCIM3186 rna-NM_001184490.1_NCIM3186 cds-NP_076906.1_NCIM3186 98.6 100.0 Verified 1 1 1 False True False False False
NCYC1407 GCA_001738225.1 Sake Asia CM005276.1:324044-324262:+ gene-YNL162W-A_NCYC1407 rna-NM_001184490.1_NCYC1407 cds-NP_076906.1_NCYC1407 99.0 100.0 Verified 1 1 1 False True False False False
PE2H3 GCA_905220325.1 Bioethanol South America HG994153.1:321001-321219:+ gene-YNL162W-A_PE2H3 rna-NM_001184490.1_PE2H3 cds-NP_076906.1_PE2H3 98.6 100.0 Verified 1 1 1 False True False False False
PE2H4 GCA_905220315.1 Bioethanol South America LR999885.1:320389-320607:+ gene-YNL162W-A_PE2H4 rna-NM_001184490.1_PE2H4 cds-NP_076906.1_PE2H4 98.6 100.0 Verified 1 1 1 False True False False False
S288C GCF_000146045.2 Laboratory Not applicable NC_001146.8:330329-330547:+ gene-YNL162W-A_S288C rna-NM_001184490.1_S288C cds-NP_076906.1_S288C 100.0 100.0 Verified 1 1 1 True True False False False
SA1 GCA_004114265.1 Bioethanol South America SDIA01000018.1:83026-83244:- gene-YNL162W-A_SA1 rna-NM_001184490.1_SA1 cds-NP_076906.1_SA1 98.6 100.0 Verified 1 1 1 False True False False False
ThermosaccDry GCA_001738605.1 Bioethanol Asia CM005500.1:317802-318020:+ gene-YNL162W-A_ThermosaccDry rna-NM_001184490.1_ThermosaccDry cds-NP_076906.1_ThermosaccDry 99.0 100.0 Verified 1 1 1 False True False False False
VR1 GCA_001738595.1 Bioethanol South America CM005468.1:336324-336542:+ gene-YNL162W-A_VR1 rna-NM_001184490.1_VR1 cds-NP_076906.1_VR1 98.6 100.0 Verified 1 1 1 False True False False False
ZTW1 GCA_000308935.1 Bioethanol Asia AMDD01000030.1:227625-227843:+ gene-YNL162W-A_ZTW1 rna-NM_001184490.1_ZTW1 cds-NP_076906.1_ZTW1 99.0 100.0 Verified 1 1 1 False True False False False

Additional files