Gene name: YNL143C
Reference locus (S288C): YNL143C
Gene biotype: protein_coding
Description: Uncharacterized membrane protein YNL143C; Protein of unknown function; expressed at both mRNA and protein levels
Top 10 interactors (score): YGR069W (0.82); YHR173C (0.812); YIL054W (0.812); YNL140C (0.78); YOR105W (0.766); YER084W (0.765); YLR358C (0.762); YNL184C (0.749); YJR146W (0.746); YPR089W (0.713); JIP4 (0.712); MTC7 (0.71); YDR008C (0.705); TPH3 (0.699); ADH5 (0.698); DAT1 (0.694); YLR149C-A (0.653); YEL068C (0.653); OLA1 (0.599); ITR2 (0.573)
Homologues (species, bitscore): Unknown
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005308.1:350509-350894:- | gene-YNL143C_AKU4011 | rna-NM_001270759.1_AKU4011 | cds-NP_001257688.1_AKU4011 | 96.6 | 98.2 | Unannotated | 1 | 1 | 0 | False | False | False | True | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000155.1:254533-254898:- | gene-YNL143C_BG1 | rna-NM_001270759.1_BG1 | cds-NP_001257688.1_BG1 | 88.5 | 93.1 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005516.1:360583-360982:- | gene-YNL143C_Bruggeman | rna-NM_001270759.1_Bruggeman | cds-NP_001257688.1_Bruggeman | 97.7 | 99.7 | Unannotated | 1 | 1 | 0 | False | False | False | True | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005532.1:403501-403881:- | gene-YNL143C_CAT1 | rna-NM_001270759.1_CAT1 | cds-NP_001257688.1_CAT1 | 95.6 | 96.9 | Unannotated | 1 | 1 | 0 | False | False | False | False | True |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005372.1:351157-351525:- | gene-YNL143C_CBS1585 | rna-NM_001270759.1_CBS1585 | cds-NP_001257688.1_CBS1585 | 92.1 | 93.8 | Unannotated | 1 | 1 | 0 | False | False | False | False | True |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005356.1:419515-419895:- | gene-YNL143C_CBS436 | rna-NM_001270759.1_CBS436 | cds-NP_001257688.1_CBS436 | 96.9 | 96.9 | Unannotated | 1 | 1 | 0 | False | False | False | False | True |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005340.1:346563-346950:- | gene-YNL143C_CBS6412 | rna-NM_001270759.1_CBS6412 | cds-NP_001257688.1_CBS6412 | 97.2 | 98.7 | Unannotated | 1 | 1 | 0 | False | False | False | True | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005324.1:347591-347942:- | gene-YNL143C_CBS6413 | rna-NM_001270759.1_CBS6413 | cds-NP_001257688.1_CBS6413 | 88.0 | 89.5 | Unannotated | 1 | 1 | 0 | False | False | False | True | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001535.1:350639-351039:- | gene-YNL143C_CENPK1137D | rna-NM_001270759.1_CENPK1137D | cds-NP_001257688.1_CENPK1137D | 95.5 | 100.0 | Unannotated | 1 | 1 | 0 | False | False | False | True | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005484.1:347492-347883:- | gene-YNL143C_EthanolRed | rna-NM_001270759.1_EthanolRed | cds-NP_001257688.1_EthanolRed | 98.2 | 99.7 | Unannotated | 1 | 1 | 0 | False | False | False | True | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005548.1:343405-343793:- | gene-YNL143C_FaliES1 | rna-NM_001270759.1_FaliES1 | cds-NP_001257688.1_FaliES1 | 97.4 | 98.9 | Unannotated | 1 | 1 | 0 | False | False | False | True | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000439.1:1-244:+ | gene-YNL143C_JAY291 | rna-NM_001270759.1_JAY291 | cds-NP_001257688.1_JAY291 | 62.0 | 62.0 | Unannotated | 1 | 1 | 0 | False | False | True | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005420.1:356642-356982:- | gene-YNL143C_MUCL30387 | rna-NM_001270759.1_MUCL30387 | cds-NP_001257688.1_MUCL30387 | 77.8 | 86.7 | Unannotated | 1 | 1 | 0 | False | False | False | True | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005452.1:391702-392098:- | gene-YNL143C_MUCL30388 | rna-NM_001270759.1_MUCL30388 | cds-NP_001257688.1_MUCL30388 | 97.4 | 100.0 | Unannotated | 1 | 1 | 0 | False | False | False | True | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005292.1:348398-348804:- | gene-YNL143C_MUCL39482 | rna-NM_001270759.1_MUCL39482 | cds-NP_001257688.1_MUCL39482 | 94.6 | 99.7 | Unannotated | 1 | 1 | 0 | False | False | False | True | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005436.1:351404-351800:- | gene-YNL143C_MUCL42920 | rna-NM_001270759.1_MUCL42920 | cds-NP_001257688.1_MUCL42920 | 97.2 | 99.4 | Unannotated | 1 | 1 | 0 | False | False | False | True | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011823.1:356763-357155:- | gene-YNL143C_NCIM3186 | rna-NM_001270759.1_NCIM3186 | cds-NP_001257688.1_NCIM3186 | 96.9 | 100.0 | Unannotated | 1 | 1 | 0 | False | False | False | False | True |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005276.1:350491-350908:- | gene-YNL143C_NCYC1407 | rna-NM_001270759.1_NCYC1407 | cds-NP_001257688.1_NCYC1407 | 91.8 | 99.7 | Unannotated | 1 | 1 | 0 | False | False | False | True | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994153.1:347516-347901:- | gene-YNL143C_PE2H3 | rna-NM_001270759.1_PE2H3 | cds-NP_001257688.1_PE2H3 | 98.2 | 98.2 | Unannotated | 1 | 1 | 0 | False | False | False | True | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999885.1:346904-347289:- | gene-YNL143C_PE2H4 | rna-NM_001270759.1_PE2H4 | cds-NP_001257688.1_PE2H4 | 98.2 | 98.2 | Unannotated | 1 | 1 | 0 | False | False | False | True | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001146.8:356794-357186:- | gene-YNL143C_S288C | rna-NM_001270759.1_S288C | cds-NP_001257688.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000018.1:56364-56749:+ | gene-YNL143C_SA1 | rna-NM_001270759.1_SA1 | cds-NP_001257688.1_SA1 | 95.4 | 98.2 | Unannotated | 1 | 1 | 0 | False | False | False | True | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005500.1:344262-344640:- | gene-YNL143C_ThermosaccDry | rna-NM_001270759.1_ThermosaccDry | cds-NP_001257688.1_ThermosaccDry | 94.9 | 96.4 | Unannotated | 1 | 1 | 0 | False | False | False | True | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005468.1:363044-363217:- | gene-YNL143C_VR1 | rna-NM_001270759.1_VR1 | cds-NP_001257688.1_VR1 | 44.2 | 44.2 | Mismatch | 1 | 1 | 0 | False | False | False | True | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000030.1:254081-254473:- | gene-YNL143C_ZTW1 | rna-NM_001270759.1_ZTW1 | cds-NP_001257688.1_ZTW1 | 99.2 | 99.7 | Unannotated | 1 | 1 | 0 | False | False | False | False | True |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047500.1:355015-355403:- | gene-YNL143C_Sparadoxus | rna-NM_001270759.1_Sparadoxus | cds-NP_001257688.1_Sparadoxus | 81.5 | 96.6 | Unannotated | 1 | 1 | 0 | False | False | False | True | False |