Gene name: YNL058C
Reference locus (S288C): YNL058C
Gene biotype: protein_coding
Description: Vacuolar membrane protein YNL058C; Putative protein of unknown function; green fluorescent protein (GFP)-fusion protein localizes to vacuole; not an essential gene; YNL058C has a paralog, PRM5, that arose from the whole genome duplication
Top 10 interactors (score): MTC6 (0.898); YGL101W (0.779); YPR063C (0.776); DOP1 (0.745); MNL2 (0.712); YCR061W (0.695); VTH2 (0.671); SGO1 (0.619); BCS1 (0.613); NIS1 (0.581); UBP7 (0.574); TED1 (0.572); OSM1 (0.572); COY1 (0.571); LAM6 (0.561); TOF2 (0.521); TSC3 (0.499); RPS21B (0.487); VAN1 (0.485); TIP1 (0.485)
Homologues (species, bitscore): Unknown
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005308.1:509442-510389:- | gene-YNL058C_AKU4011 | rna-NM_001182897.1_AKU4011 | cds-NP_014340.1_AKU4011 | 99.1 | 99.6 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000155.1:413445-414389:- | gene-YNL058C_BG1 | rna-NM_001182897.1_BG1 | cds-NP_014340.1_BG1 | 99.2 | 99.3 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005516.1:520156-521103:- | gene-YNL058C_Bruggeman | rna-NM_001182897.1_Bruggeman | cds-NP_014340.1_Bruggeman | 99.3 | 99.6 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005532.1:563148-564092:- | gene-YNL058C_CAT1 | rna-NM_001182897.1_CAT1 | cds-NP_014340.1_CAT1 | 99.2 | 99.3 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005372.1:510112-511059:- | gene-YNL058C_CBS1585 | rna-NM_001182897.1_CBS1585 | cds-NP_014340.1_CBS1585 | 99.1 | 99.6 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005356.1:578405-579349:- | gene-YNL058C_CBS436 | rna-NM_001182897.1_CBS436 | cds-NP_014340.1_CBS436 | 99.1 | 99.3 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005340.1:505205-506152:- | gene-YNL058C_CBS6412 | rna-NM_001182897.1_CBS6412 | cds-NP_014340.1_CBS6412 | 99.1 | 99.6 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005324.1:506523-507470:- | gene-YNL058C_CBS6413 | rna-NM_001182897.1_CBS6413 | cds-NP_014340.1_CBS6413 | 99.1 | 99.6 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001535.1:509727-510677:- | gene-YNL058C_CENPK1137D | rna-NM_001182897.1_CENPK1137D | cds-NP_014340.1_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005484.1:512265-513212:- | gene-YNL058C_EthanolRed | rna-NM_001182897.1_EthanolRed | cds-NP_014340.1_EthanolRed | 99.0 | 99.6 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005548.1:502790-503737:- | gene-YNL058C_FaliES1 | rna-NM_001182897.1_FaliES1 | cds-NP_014340.1_FaliES1 | 99.0 | 99.6 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000040.1:17876-18820:- | gene-YNL058C_JAY291 | rna-NM_001182897.1_JAY291 | cds-NP_014340.1_JAY291 | 99.2 | 99.3 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005420.1:516308-517255:- | gene-YNL058C_MUCL30387 | rna-NM_001182897.1_MUCL30387 | cds-NP_014340.1_MUCL30387 | 99.1 | 99.6 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005452.1:551968-552915:- | gene-YNL058C_MUCL30388 | rna-NM_001182897.1_MUCL30388 | cds-NP_014340.1_MUCL30388 | 99.0 | 99.6 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005292.1:507528-508475:- | gene-YNL058C_MUCL39482 | rna-NM_001182897.1_MUCL39482 | cds-NP_014340.1_MUCL39482 | 99.1 | 99.6 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005436.1:511420-512367:- | gene-YNL058C_MUCL42920 | rna-NM_001182897.1_MUCL42920 | cds-NP_014340.1_MUCL42920 | 99.4 | 99.6 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011823.1:515732-516682:- | gene-YNL058C_NCIM3186 | rna-NM_001182897.1_NCIM3186 | cds-NP_014340.1_NCIM3186 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005276.1:509580-510527:- | gene-YNL058C_NCYC1407 | rna-NM_001182897.1_NCYC1407 | cds-NP_014340.1_NCYC1407 | 99.1 | 99.6 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994153.1:512792-513736:- | gene-YNL058C_PE2H3 | rna-NM_001182897.1_PE2H3 | cds-NP_014340.1_PE2H3 | 99.2 | 99.3 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999885.1:507867-508811:- | gene-YNL058C_PE2H4 | rna-NM_001182897.1_PE2H4 | cds-NP_014340.1_PE2H4 | 99.2 | 99.3 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001146.8:515763-516713:- | gene-YNL058C_S288C | rna-NM_001182897.1_S288C | cds-NP_014340.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000024.1:100712-101659:- | gene-YNL058C_SA1 | rna-NM_001182897.1_SA1 | cds-NP_014340.1_SA1 | 99.2 | 99.6 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005500.1:503665-504612:- | gene-YNL058C_ThermosaccDry | rna-NM_001182897.1_ThermosaccDry | cds-NP_014340.1_ThermosaccDry | 99.0 | 99.6 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005468.1:522753-523697:- | gene-YNL058C_VR1 | rna-NM_001182897.1_VR1 | cds-NP_014340.1_VR1 | 99.2 | 99.3 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000030.1:412985-413932:- | gene-YNL058C_ZTW1 | rna-NM_001182897.1_ZTW1 | cds-NP_014340.1_ZTW1 | 99.2 | 99.6 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047500.1:519172-520122:- | gene-YNL058C_Sparadoxus | rna-NM_001182897.1_Sparadoxus | cds-NP_014340.1_Sparadoxus | 86.2 | 99.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |