YNL054W-B (YNL054W-B)

Gene profile

Gene name: YNL054W-B
Reference locus (S288C): YNL054W-B
Gene biotype: protein_coding

Description: Unknown

Top 10 interactors (score): Unknown

Homologues (species, bitscore): Unknown

External links:
Saccharomyces genome database (SGD)
STRING database
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
UCSC Genome Browser

Comparative analysis of strains

Search table

strain assembly application macro_region gene_coord geneID rnaID protID %id %cov_exon status copyNumber copyID nORFs match_ref_CDS validORF missing_startCodon missing_stopCodon outOfFrame_stopCodon
BG1 GCA_001932575.1 Bioethanol South America MSHP01000022.1:1-2867:+ gene-YNL054W-B_BG1 rna-NM_001281536.2_BG1 cds-NP_001268465.1_BG1 48.3 50.9 Unannotated 1 1 0 False False True False False
Bruggeman GCA_001738585.1 Bread Not Applicable CM005505.1:78741-79412:+ gene-YNL054W-B_Bruggeman rna-NM_001281536.2_Bruggeman cds-NP_001268465.1_Bruggeman 12.7 12.7 Verified 1 1 0 False False True False False
CAT1 GCA_001738705.1 Bioethanol South America MBWC01000295.1:197-2053:+ gene-YNL054W-B_CAT1 rna-NM_001281536.2_CAT1 cds-NP_001268465.1_CAT1 32.7 35.3 Verified 1 1 0 False False False True False
CENPK1137D GCA_000269885.1 Laboratory Not Applicable CM001535.1:515998-516307:+ gene-YNL054W-B_CENPK1137D rna-NM_001281536.2_CENPK1137D cds-NP_001268465.1_CENPK1137D 5.8 5.9 Verified 1 1 0 False False True False False
JAY291 GCA_000182315.2 Bioethanol South America ACFL01000218.1:23-499:- gene-YNL054W-B_JAY291 rna-NM_001281536.2_JAY291 cds-NP_001268465.1_JAY291 9.0 9.0 Verified 1 1 0 False False True False False
MUCL30388 GCA_001738495.1 Bread Europe MBVW01000030.1:1-495:+ gene-YNL054W-B_MUCL30388 rna-NM_001281536.2_MUCL30388 cds-NP_001268465.1_MUCL30388 9.4 9.4 Verified 1 1 0 False False True False False
MUCL42920 GCA_001738485.1 Bread Europe MBVV01000104.1:1-1172:+ gene-YNL054W-B_MUCL42920 rna-NM_001281536.2_MUCL42920 cds-NP_001268465.1_MUCL42920 21.5 21.9 Mismatch 1 1 0 False False True False False
NCIM3186 GCA_001029075.1 Bioethanol Asia CP011821.1:215422-220682:- gene-YNL054W-B_NCIM3186 rna-NM_001281536.2_NCIM3186 cds-NP_001268465.1_NCIM3186 67.8 99.7 Mismatch 1 1 0 False False False True False
PE2H3 GCA_905220325.1 Bioethanol South America HG994144.1:554418-559686:+ gene-YNL054W-B_PE2H3 rna-NM_001281536.2_PE2H3 cds-NP_001268465.1_PE2H3 98.3 99.9 Mismatch 1 1 1 False True False False False
S288C GCF_000146045.2 Laboratory Not applicable NC_001146.8:519456-524706:+ gene-YNL054W-B_S288C rna-NM_001281536.2_S288C cds-NP_001268465.1_S288C 100.0 100.0 Verified 1 1 1 True True False False False
VR1 GCA_001738595.1 Bioethanol South America MBVZ01000049.1:1-454:+ gene-YNL054W-B_VR1 rna-NM_001281536.2_VR1 cds-NP_001268465.1_VR1 8.5 8.6 Mismatch 1 1 0 False False True False False

Additional files