YNL050C (YNL050C)

Gene profile

Gene name: YNL050C
Reference locus (S288C): YNL050C
Gene biotype: protein_coding

Description: Uncharacterized protein ynl050c; Putative protein of unknown function; YNL050c is not an essential gene

Top 10 interactors (score): YCR016W (0.832); TMA23 (0.826); SLP1 (0.814); CGR1 (0.789); FPR3 (0.744); ALB1 (0.715); HTB1 (0.483)

Homologues (species, bitscore): Unknown

External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser

Comparative analysis of strains

Search table

strain assembly application macro_region gene_coord geneID rnaID protID %id %cov_exon status copyNumber copyID nORFs match_ref_CDS validORF missing_startCodon missing_stopCodon outOfFrame_stopCodon
AKU4011 GCA_001738255.1 Sake Asia CM005308.1:521878-522781:- gene-YNL050C_AKU4011 rna-NM_001182889.3_AKU4011 cds-NP_014348.3_AKU4011 99.2 100.0 Verified 1 1 1 False True False False False
BG1 GCA_001932575.1 Bioethanol South America MSHP01000155.1:425839-426742:- gene-YNL050C_BG1 rna-NM_001182889.3_BG1 cds-NP_014348.3_BG1 99.8 100.0 Verified 1 1 1 False True False False False
Bruggeman GCA_001738585.1 Bread Not Applicable CM005516.1:538989-539892:- gene-YNL050C_Bruggeman rna-NM_001182889.3_Bruggeman cds-NP_014348.3_Bruggeman 99.8 100.0 Verified 1 1 1 False True False False False
CAT1 GCA_001738705.1 Bioethanol South America CM005532.1:575551-576454:- gene-YNL050C_CAT1 rna-NM_001182889.3_CAT1 cds-NP_014348.3_CAT1 99.8 100.0 Verified 1 1 1 False True False False False
CBS1585 GCA_001738375.1 Sake Asia CM005372.1:522548-523451:- gene-YNL050C_CBS1585 rna-NM_001182889.3_CBS1585 cds-NP_014348.3_CBS1585 99.2 100.0 Verified 1 1 1 False True False False False
CBS436 GCA_001738355.1 Sake Asia CM005356.1:590799-591702:- gene-YNL050C_CBS436 rna-NM_001182889.3_CBS436 cds-NP_014348.3_CBS436 99.8 100.0 Mismatch 1 1 1 False True False False False
CBS6412 GCA_001738345.1 Sake Asia CM005340.1:517641-518544:- gene-YNL050C_CBS6412 rna-NM_001182889.3_CBS6412 cds-NP_014348.3_CBS6412 99.2 100.0 Mismatch 1 1 1 False True False False False
CBS6413 GCA_001738265.1 Sake Asia CM005324.1:518959-519862:- gene-YNL050C_CBS6413 rna-NM_001182889.3_CBS6413 cds-NP_014348.3_CBS6413 99.2 100.0 Verified 1 1 1 False True False False False
CENPK1137D GCA_000269885.1 Laboratory Not Applicable CM001535.1:527665-528568:- gene-YNL050C_CENPK1137D rna-NM_001182889.3_CENPK1137D cds-NP_014348.3_CENPK1137D 100.0 100.0 Verified 1 1 1 True True False False False
EthanolRed GCA_001738615.1 Bioethanol Asia CM005484.1:524700-525603:- gene-YNL050C_EthanolRed rna-NM_001182889.3_EthanolRed cds-NP_014348.3_EthanolRed 99.6 100.0 Verified 1 1 1 False True False False False
FaliES1 GCA_001738715.1 Bioethanol Asia CM005548.1:515225-516128:- gene-YNL050C_FaliES1 rna-NM_001182889.3_FaliES1 cds-NP_014348.3_FaliES1 99.6 100.0 Verified 1 1 1 False True False False False
JAY291 GCA_000182315.2 Bioethanol South America ACFL01000040.1:30269-31172:- gene-YNL050C_JAY291 rna-NM_001182889.3_JAY291 cds-NP_014348.3_JAY291 99.8 100.0 Verified 1 1 1 False True False False False
MUCL30387 GCA_001738515.1 Bread Europe CM005420.1:535323-536226:- gene-YNL050C_MUCL30387 rna-NM_001182889.3_MUCL30387 cds-NP_014348.3_MUCL30387 99.7 100.0 Verified 1 1 1 False True False False False
MUCL30388 GCA_001738495.1 Bread Europe CM005452.1:564743-565646:- gene-YNL050C_MUCL30388 rna-NM_001182889.3_MUCL30388 cds-NP_014348.3_MUCL30388 99.6 100.0 Verified 1 1 1 False True False False False
MUCL39482 GCA_001738235.1 Sake Asia CM005292.1:519964-520867:- gene-YNL050C_MUCL39482 rna-NM_001182889.3_MUCL39482 cds-NP_014348.3_MUCL39482 99.2 100.0 Verified 1 1 1 False True False False False
MUCL42920 GCA_001738485.1 Bread Europe CM005436.1:524036-524939:- gene-YNL050C_MUCL42920 rna-NM_001182889.3_MUCL42920 cds-NP_014348.3_MUCL42920 99.8 100.0 Verified 1 1 1 False True False False False
NCIM3186 GCA_001029075.1 Bioethanol Asia CP011823.1:534048-534951:- gene-YNL050C_NCIM3186 rna-NM_001182889.3_NCIM3186 cds-NP_014348.3_NCIM3186 99.3 100.0 Verified 1 1 1 False True False False False
NCYC1407 GCA_001738225.1 Sake Asia CM005276.1:522016-522919:- gene-YNL050C_NCYC1407 rna-NM_001182889.3_NCYC1407 cds-NP_014348.3_NCYC1407 99.2 100.0 Verified 1 1 1 False True False False False
PE2H3 GCA_905220325.1 Bioethanol South America HG994153.1:525186-526089:- gene-YNL050C_PE2H3 rna-NM_001182889.3_PE2H3 cds-NP_014348.3_PE2H3 99.8 100.0 Verified 1 1 1 False True False False False
PE2H4 GCA_905220315.1 Bioethanol South America LR999885.1:520261-521164:- gene-YNL050C_PE2H4 rna-NM_001182889.3_PE2H4 cds-NP_014348.3_PE2H4 99.8 100.0 Verified 1 1 1 False True False False False
S288C GCF_000146045.2 Laboratory Not applicable NC_001146.8:534079-534982:- gene-YNL050C_S288C rna-NM_001182889.3_S288C cds-NP_014348.3_S288C 100.0 100.0 Verified 1 1 1 True True False False False
SA1 GCA_004114265.1 Bioethanol South America SDIA01000024.1:113110-114013:- gene-YNL050C_SA1 rna-NM_001182889.3_SA1 cds-NP_014348.3_SA1 99.8 100.0 Verified 1 1 1 False True False False False
ThermosaccDry GCA_001738605.1 Bioethanol Asia CM005500.1:516100-517003:- gene-YNL050C_ThermosaccDry rna-NM_001182889.3_ThermosaccDry cds-NP_014348.3_ThermosaccDry 99.6 100.0 Verified 1 1 1 False True False False False
VR1 GCA_001738595.1 Bioethanol South America CM005468.1:535147-536050:- gene-YNL050C_VR1 rna-NM_001182889.3_VR1 cds-NP_014348.3_VR1 99.8 100.0 Verified 1 1 1 False True False False False
ZTW1 GCA_000308935.1 Bioethanol Asia AMDD01000030.1:425421-426324:- gene-YNL050C_ZTW1 rna-NM_001182889.3_ZTW1 cds-NP_014348.3_ZTW1 99.5 100.0 Verified 1 1 1 False True False False False
Sparadoxus GCF_002079055.1 Not applicable Not applicable NC_047500.1:531332-532236:- gene-YNL050C_Sparadoxus rna-NM_001182889.3_Sparadoxus cds-NP_014348.3_Sparadoxus 88.8 100.0 Verified 1 1 1 False True False False False

Additional files