YNL034W (YNL034W)

Gene profile

Gene name: YNL034W
Reference locus (S288C): YNL034W
Gene biotype: protein_coding

Description: Uncharacterized protein YNL034W; Putative protein of unknown function; not an essential gene; YNL034W has a paralog, YNL018C, that arose from a segmental duplication; To yeast YNL018c

Top 10 interactors (score): YNL033W (0.927); YNL019C (0.925); YNL018C (0.832); RCM1 (0.716); SWS2 (0.713); IMP4 (0.697); EOS1 (0.69); FAR7 (0.673); IGD1 (0.616); COG6 (0.61); ARK1 (0.559); CNM67 (0.483); SAM50 (0.482)

Homologues (species, bitscore): Unknown

External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser

Comparative analysis of strains

Search table

strain assembly application macro_region gene_coord geneID rnaID protID %id %cov_exon status copyNumber copyID nORFs match_ref_CDS validORF missing_startCodon missing_stopCodon outOfFrame_stopCodon
BG1 GCA_001932575.1 Bioethanol South America MSHP01000155.1:455933-457771:+ gene-YNL034W_BG1 rna-NM_001182873.1_BG1 cds-NP_014364.1_BG1 97.4 100.0 Verified 1 1 1 False True False False False
Bruggeman GCA_001738585.1 Bread Not Applicable CM005516.1:599809-601646:- gene-YNL034W_Bruggeman rna-NM_001182873.1_Bruggeman cds-NP_014364.1_Bruggeman 87.9 99.9 Unannotated 1 1 0 False False False True False
CAT1 GCA_001738705.1 Bioethanol South America CM005532.1:635242-637080:- gene-YNL034W_CAT1 rna-NM_001182873.1_CAT1 cds-NP_014364.1_CAT1 97.2 100.0 Verified 1 1 1 False True False False False
CBS436 GCA_001738355.1 Sake Asia CM005356.1:650434-652272:- gene-YNL034W_CBS436 rna-NM_001182873.1_CBS436 cds-NP_014364.1_CBS436 97.0 100.0 Mismatch 1 1 1 False True False False False
JAY291 GCA_000182315.2 Bioethanol South America ACFL01000134.1:660-2498:+ gene-YNL034W_JAY291 rna-NM_001182873.1_JAY291 cds-NP_014364.1_JAY291 97.0 100.0 Mismatch 1 1 1 False True False False False
MUCL42920 GCA_001738485.1 Bread Europe CM005436.1:583740-585578:- gene-YNL034W_MUCL42920 rna-NM_001182873.1_MUCL42920 cds-NP_014364.1_MUCL42920 97.0 100.0 Mismatch 1 1 1 False True False False False
NCIM3186 GCA_001029075.1 Bioethanol Asia CP011823.1:570446-572284:+ gene-YNL034W_NCIM3186 rna-NM_001182873.1_NCIM3186 cds-NP_014364.1_NCIM3186 92.2 100.0 Verified 1 1 0 False False True False False
PE2H3 GCA_905220325.1 Bioethanol South America HG994153.1:554935-556773:+ gene-YNL034W_PE2H3 rna-NM_001182873.1_PE2H3 cds-NP_014364.1_PE2H3 97.6 100.0 Verified 1 1 1 False True False False False
PE2H4 GCA_905220315.1 Bioethanol South America LR999885.1:585698-587536:- gene-YNL034W_PE2H4 rna-NM_001182873.1_PE2H4 cds-NP_014364.1_PE2H4 97.3 100.0 Verified 1 1 1 False True False False False
S288C GCF_000146045.2 Laboratory Not applicable NC_001146.8:570477-572315:+ gene-YNL034W_S288C rna-NM_001182873.1_S288C cds-NP_014364.1_S288C 100.0 100.0 Verified 1 1 1 True True False False False
SA1 GCA_004114265.1 Bioethanol South America SDIA01000140.1:660-2498:+ gene-YNL034W_SA1 rna-NM_001182873.1_SA1 cds-NP_014364.1_SA1 79.0 100.0 Mismatch 1 1 0 False False False True False
VR1 GCA_001738595.1 Bioethanol South America CM005468.1:564896-566734:+ gene-YNL034W_VR1 rna-NM_001182873.1_VR1 cds-NP_014364.1_VR1 97.4 100.0 Verified 1 1 1 False True False False False
ZTW1 GCA_000308935.1 Bioethanol Asia AMDD01000030.1:484972-486810:- gene-YNL034W_ZTW1 rna-NM_001182873.1_ZTW1 cds-NP_014364.1_ZTW1 97.8 100.0 Mismatch 1 1 1 False True False False False
Sparadoxus GCF_002079055.1 Not applicable Not applicable NC_047500.1:591222-593048:- gene-YNL034W_Sparadoxus rna-NM_001182873.1_Sparadoxus cds-NP_014364.1_Sparadoxus 80.1 99.1 Verified 1 1 1 False True False False False

Additional files