YNL018C (YNL018C)


Gene profile

Gene name: YNL018C
Reference locus (S288C): YNL018C
Gene biotype: protein_coding

Description: Putative protein of unknown function; YNL018C has a paralog, YNL034W, that arose from a segmental duplication; To yeast YNL034w

Top 10 interactors (score): YNL019C (0.926); YNL033W (0.924); YNL034W (0.832); ATO2 (0.591); PUB1 (0.452); VTH1 (0.43)

Homologues (species, bitscore): Unknown

External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser


Comparative analysis of strains

Search table

strain assembly application macro_region gene_coord geneID rnaID protID %id %cov_exon status copyNumber copyID nORFs match_ref_CDS validORF missing_startCodon missing_stopCodon outOfFrame_stopCodon
AKU4011 GCA_001738255.1 Sake Asia CM005308.1:582620-584458:- gene-YNL018C_AKU4011 rna-NM_001182857.3_AKU4011 cds-NP_014380.3_AKU4011 98.9 100.0 Verified 1 1 1 False True False False False
BG1 GCA_001932575.1 Bioethanol South America MSHP01000155.1:485358-487196:- gene-YNL018C_BG1 rna-NM_001182857.3_BG1 cds-NP_014380.3_BG1 97.0 100.0 Mismatch 1 1 1 False True False False False
Bruggeman GCA_001738585.1 Bread Not Applicable CM005516.1:569779-571617:+ gene-YNL018C_Bruggeman rna-NM_001182857.3_Bruggeman cds-NP_014380.3_Bruggeman 98.8 100.0 Verified 1 1 1 False True False False False
CBS1585 GCA_001738375.1 Sake Asia CM005372.1:588306-590144:- gene-YNL018C_CBS1585 rna-NM_001182857.3_CBS1585 cds-NP_014380.3_CBS1585 98.9 100.0 Verified 1 1 1 False True False False False
CBS6412 GCA_001738345.1 Sake Asia CM005340.1:578110-579948:- gene-YNL018C_CBS6412 rna-NM_001182857.3_CBS6412 cds-NP_014380.3_CBS6412 98.5 100.0 Mismatch 1 1 1 False True False False False
CBS6413 GCA_001738265.1 Sake Asia CM005324.1:579480-581318:- gene-YNL018C_CBS6413 rna-NM_001182857.3_CBS6413 cds-NP_014380.3_CBS6413 98.8 100.0 Verified 1 1 1 False True False False False
CENPK1137D GCA_000269885.1 Laboratory Not Applicable CM001535.1:593563-595411:- gene-YNL018C_CENPK1137D rna-NM_001182857.3_CENPK1137D cds-NP_014380.3_CENPK1137D 97.0 99.4 Unannotated 1 1 0 False False True False False
EthanolRed GCA_001738615.1 Bioethanol Asia CM005484.1:555033-556871:+ gene-YNL018C_EthanolRed rna-NM_001182857.3_EthanolRed cds-NP_014380.3_EthanolRed 98.6 100.0 Verified 1 1 1 False True False False False
FaliES1 GCA_001738715.1 Bioethanol Asia CM005548.1:575505-577343:- gene-YNL018C_FaliES1 rna-NM_001182857.3_FaliES1 cds-NP_014380.3_FaliES1 98.5 100.0 Verified 1 1 1 False True False False False
MUCL30387 GCA_001738515.1 Bread Europe CM005420.1:595691-597632:- gene-YNL018C_MUCL30387 rna-NM_001182857.3_MUCL30387 cds-NP_014380.3_MUCL30387 93.3 100.0 Unannotated 1 1 0 False False False True False
MUCL30388 GCA_001738495.1 Bread Europe CM005452.1:609046-610884:+ gene-YNL018C_MUCL30388 rna-NM_001182857.3_MUCL30388 cds-NP_014380.3_MUCL30388 98.0 100.0 Verified 1 1 1 False True False False False
MUCL39482 GCA_001738235.1 Sake Asia CM005292.1:579901-581699:- gene-YNL018C_MUCL39482 rna-NM_001182857.3_MUCL39482 cds-NP_014380.3_MUCL39482 96.7 97.8 Unannotated 1 1 0 False False False True False
NCIM3186 GCA_001029075.1 Bioethanol Asia CP011823.1:599905-601743:- gene-YNL018C_NCIM3186 rna-NM_001182857.3_NCIM3186 cds-NP_014380.3_NCIM3186 99.7 100.0 Verified 1 1 1 False True False False False
NCYC1407 GCA_001738225.1 Sake Asia CM005276.1:582105-583943:- gene-YNL018C_NCYC1407 rna-NM_001182857.3_NCYC1407 cds-NP_014380.3_NCYC1407 98.9 100.0 Verified 1 1 1 False True False False False
PE2H3 GCA_905220325.1 Bioethanol South America HG994153.1:584380-586218:- gene-YNL018C_PE2H3 rna-NM_001182857.3_PE2H3 cds-NP_014380.3_PE2H3 96.9 100.0 Mismatch 1 1 1 False True False False False
PE2H4 GCA_905220315.1 Bioethanol South America LR999885.1:556277-558115:+ gene-YNL018C_PE2H4 rna-NM_001182857.3_PE2H4 cds-NP_014380.3_PE2H4 96.8 100.0 Verified 1 1 1 False True False False False
S288C GCF_000146045.2 Laboratory Not applicable NC_001146.8:599936-601774:- gene-YNL018C_S288C rna-NM_001182857.3_S288C cds-NP_014380.3_S288C 100.0 100.0 Verified 1 1 1 True True False False False
ThermosaccDry GCA_001738605.1 Bioethanol Asia CM005500.1:546442-548280:+ gene-YNL018C_ThermosaccDry rna-NM_001182857.3_ThermosaccDry cds-NP_014380.3_ThermosaccDry 98.5 100.0 Verified 1 1 1 False True False False False
ZTW1 GCA_000308935.1 Bioethanol Asia AMDD01000030.1:455515-457353:+ gene-YNL018C_ZTW1 rna-NM_001182857.3_ZTW1 cds-NP_014380.3_ZTW1 97.8 100.0 Verified 1 1 1 False True False False False
Sparadoxus GCF_002079055.1 Not applicable Not applicable NC_047500.1:561916-563742:+ gene-YNL018C_Sparadoxus rna-NM_001182857.3_Sparadoxus cds-NP_014380.3_Sparadoxus 80.6 98.9 Verified 1 1 1 False True False False False

Additional files