Gene name: YNK1
Reference locus (S288C): YKL067W
Gene biotype: protein_coding
Description: Nucleoside diphosphate kinase; catalyzes the transfer of gamma phosphates from nucleoside triphosphates, usually ATP, to nucleoside diphosphates by a mechanism that involves formation of an autophosphorylated enzyme intermediate; protein abundance increases in response to DNA replication stress; Belongs to the NDK family
Top 10 interactors (score): CDC8 (0.996); URA6 (0.991); TPI1 (0.987); SOD1 (0.987); ADK1 (0.983); MXR1 (0.979); STE4 (0.978); TOM40 (0.976); ADK2 (0.969); UGA1 (0.969); ACO1 (0.969); FPR1 (0.969); NQM1 (0.967); TAL1 (0.967); FUM1 (0.965); GUK1 (0.964); URA7 (0.963); URA8 (0.962); DUT1 (0.957); HAM1 (0.953)
Homologues (species, bitscore): NME1-NME2 (Homo sapiens, 203.0); Gm20390 (Mus musculus, 203.8); nme2a (Danio rerio, 201.1); nme2 (Xenopus tropicalis, 198.4); Awd (Drosophila melanogaster, 204.1); ndk-1 (Caenorhabditis elegans, 206.8); AT4G23900 (Arabidopsis thaliana, 188.0)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005305.1:300801-301262:+ | gene-YKL067W_AKU4011 | rna-NM_001179633.1_AKU4011 | cds-NP_012856.1_AKU4011 | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000113.1:342968-343429:- | gene-YKL067W_BG1 | rna-NM_001179633.1_BG1 | cds-NP_012856.1_BG1 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005513.1:319850-320311:+ | gene-YKL067W_Bruggeman | rna-NM_001179633.1_Bruggeman | cds-NP_012856.1_Bruggeman | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005529.1:315545-316006:+ | gene-YKL067W_CAT1 | rna-NM_001179633.1_CAT1 | cds-NP_012856.1_CAT1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005369.1:313530-313991:+ | gene-YKL067W_CBS1585 | rna-NM_001179633.1_CBS1585 | cds-NP_012856.1_CBS1585 | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005353.1:311673-312134:+ | gene-YKL067W_CBS436 | rna-NM_001179633.1_CBS436 | cds-NP_012856.1_CBS436 | 98.7 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005337.1:297668-298129:+ | gene-YKL067W_CBS6412 | rna-NM_001179633.1_CBS6412 | cds-NP_012856.1_CBS6412 | 99.1 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005321.1:313496-313957:+ | gene-YKL067W_CBS6413 | rna-NM_001179633.1_CBS6413 | cds-NP_012856.1_CBS6413 | 98.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001532.1:314473-314934:+ | gene-YKL067W_CENPK1137D | rna-NM_001179633.1_CENPK1137D | cds-NP_012856.1_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005481.1:311503-311964:+ | gene-YKL067W_EthanolRed | rna-NM_001179633.1_EthanolRed | cds-NP_012856.1_EthanolRed | 98.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005545.1:312316-312777:+ | gene-YKL067W_FaliES1 | rna-NM_001179633.1_FaliES1 | cds-NP_012856.1_FaliES1 | 98.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000080.1:330-791:+ | gene-YKL067W_JAY291 | rna-NM_001179633.1_JAY291 | cds-NP_012856.1_JAY291 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005417.1:320749-321210:+ | gene-YKL067W_MUCL30387 | rna-NM_001179633.1_MUCL30387 | cds-NP_012856.1_MUCL30387 | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005449.1:315659-316120:+ | gene-YKL067W_MUCL30388 | rna-NM_001179633.1_MUCL30388 | cds-NP_012856.1_MUCL30388 | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005289.1:312827-313288:+ | gene-YKL067W_MUCL39482 | rna-NM_001179633.1_MUCL39482 | cds-NP_012856.1_MUCL39482 | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005433.1:317745-318206:+ | gene-YKL067W_MUCL42920 | rna-NM_001179633.1_MUCL42920 | cds-NP_012856.1_MUCL42920 | 98.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011820.1:314801-315262:+ | gene-YKL067W_NCIM3186 | rna-NM_001179633.1_NCIM3186 | cds-NP_012856.1_NCIM3186 | 98.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005273.1:313022-313483:+ | gene-YKL067W_NCYC1407 | rna-NM_001179633.1_NCYC1407 | cds-NP_012856.1_NCYC1407 | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994150.1:320668-321129:+ | gene-YKL067W_PE2H3 | rna-NM_001179633.1_PE2H3 | cds-NP_012856.1_PE2H3 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999882.1:322334-322795:+ | gene-YKL067W_PE2H4 | rna-NM_001179633.1_PE2H4 | cds-NP_012856.1_PE2H4 | 98.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001143.9:314812-315273:+ | gene-YKL067W_S288C | rna-NM_001179633.1_S288C | cds-NP_012856.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000008.1:230747-231208:+ | gene-YKL067W_SA1 | rna-NM_001179633.1_SA1 | cds-NP_012856.1_SA1 | 98.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005497.1:313506-313967:+ | gene-YKL067W_ThermosaccDry | rna-NM_001179633.1_ThermosaccDry | cds-NP_012856.1_ThermosaccDry | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005465.1:312660-313121:+ | gene-YKL067W_VR1 | rna-NM_001179633.1_VR1 | cds-NP_012856.1_VR1 | 98.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000022.1:311550-312011:+ | gene-YKL067W_ZTW1 | rna-NM_001179633.1_ZTW1 | cds-NP_012856.1_ZTW1 | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047497.1:330689-331150:+ | gene-YKL067W_Sparadoxus | rna-NM_001179633.1_Sparadoxus | cds-NP_012856.1_Sparadoxus | 90.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |