YND1 (YER005W)


Gene profile

Gene name: YND1
Reference locus (S288C): YER005W
Gene biotype: protein_coding

Description: Apyrase with wide substrate specificity; helps prevent inhibition of glycosylation by hydrolyzing nucleoside tri- and diphosphates that inhibit glycotransferases; partially redundant with Gda1p; mediates adenovirus E4orf4-induced toxicity

Top 10 interactors (score): ADE12 (0.944); ADE16 (0.944); ADE17 (0.944); ADO1 (0.923); IMD4 (0.921); ADE13 (0.919); AMD1 (0.918); URA3 (0.918); HAM1 (0.914); CDC8 (0.913); URA8 (0.908); URA7 (0.908); RNR1 (0.908); RNR3 (0.908); URA6 (0.907); CDC21 (0.905); ISN1 (0.904); RNR2 (0.904); URK1 (0.904); RNR4 (0.904)

Homologues (species, bitscore): ENTPD7 (Homo sapiens, 247.3); Entpd7 (Mus musculus, 246.9); entpd4 (Danio rerio, 240.4); entpd7 (Xenopus tropicalis, 249.2); NTPase (Drosophila melanogaster, 125.9); mig-23 (Caenorhabditis elegans, 243.0); AT1G14250 (Arabidopsis thaliana, 141.0)

External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser


Comparative analysis of strains

Search table

strain assembly application macro_region gene_coord geneID rnaID protID %id %cov_exon status copyNumber copyID nORFs match_ref_CDS validORF missing_startCodon missing_stopCodon outOfFrame_stopCodon
AKU4011 GCA_001738255.1 Sake Asia CM005299.1:154240-156132:+ gene-YER005W_AKU4011 rna-NM_001178896.3_AKU4011 cds-NP_010920.3_AKU4011 99.3 100.0 Verified 1 1 1 False True False False False
BG1 GCA_001932575.1 Bioethanol South America MSHP01000011.1:269550-271442:- gene-YER005W_BG1 rna-NM_001178896.3_BG1 cds-NP_010920.3_BG1 99.6 100.0 Verified 1 1 1 False True False False False
Bruggeman GCA_001738585.1 Bread Not Applicable CM005507.1:161927-163819:+ gene-YER005W_Bruggeman rna-NM_001178896.3_Bruggeman cds-NP_010920.3_Bruggeman 99.8 100.0 Verified 1 1 1 True True False False False
CAT1 GCA_001738705.1 Bioethanol South America CM005523.1:157158-159050:+ gene-YER005W_CAT1 rna-NM_001178896.3_CAT1 cds-NP_010920.3_CAT1 99.6 100.0 Verified 1 1 1 False True False False False
CBS1585 GCA_001738375.1 Sake Asia CM005363.1:154549-156441:+ gene-YER005W_CBS1585 rna-NM_001178896.3_CBS1585 cds-NP_010920.3_CBS1585 99.3 100.0 Verified 1 1 1 False True False False False
CBS436 GCA_001738355.1 Sake Asia CM005347.1:155817-157709:+ gene-YER005W_CBS436 rna-NM_001178896.3_CBS436 cds-NP_010920.3_CBS436 99.9 100.0 Mismatch 1 1 1 True True False False False
CBS6412 GCA_001738345.1 Sake Asia CM005331.1:154443-156335:+ gene-YER005W_CBS6412 rna-NM_001178896.3_CBS6412 cds-NP_010920.3_CBS6412 99.4 100.0 Mismatch 1 1 1 False True False False False
CBS6413 GCA_001738265.1 Sake Asia CM005315.1:159089-160981:+ gene-YER005W_CBS6413 rna-NM_001178896.3_CBS6413 cds-NP_010920.3_CBS6413 99.4 100.0 Verified 1 1 1 False True False False False
CENPK1137D GCA_000269885.1 Laboratory Not Applicable CM001526.1:158376-160268:+ gene-YER005W_CENPK1137D rna-NM_001178896.3_CENPK1137D cds-NP_010920.3_CENPK1137D 100.0 100.0 Verified 1 1 1 True True False False False
EthanolRed GCA_001738615.1 Bioethanol Asia CM005475.1:154904-156796:+ gene-YER005W_EthanolRed rna-NM_001178896.3_EthanolRed cds-NP_010920.3_EthanolRed 99.4 100.0 Verified 1 1 1 False True False False False
FaliES1 GCA_001738715.1 Bioethanol Asia CM005539.1:155164-157056:+ gene-YER005W_FaliES1 rna-NM_001178896.3_FaliES1 cds-NP_010920.3_FaliES1 99.5 100.0 Verified 1 1 1 False True False False False
JAY291 GCA_000182315.2 Bioethanol South America ACFL01000024.1:22133-24025:+ gene-YER005W_JAY291 rna-NM_001178896.3_JAY291 cds-NP_010920.3_JAY291 99.6 100.0 Verified 1 1 1 False True False False False
MUCL30387 GCA_001738515.1 Bread Europe CM005411.1:158463-160355:+ gene-YER005W_MUCL30387 rna-NM_001178896.3_MUCL30387 cds-NP_010920.3_MUCL30387 99.9 100.0 Verified 1 1 1 True True False False False
MUCL30388 GCA_001738495.1 Bread Europe CM005443.1:154985-156877:+ gene-YER005W_MUCL30388 rna-NM_001178896.3_MUCL30388 cds-NP_010920.3_MUCL30388 99.5 100.0 Verified 1 1 1 False True False False False
MUCL39482 GCA_001738235.1 Sake Asia CM005283.1:153585-155477:+ gene-YER005W_MUCL39482 rna-NM_001178896.3_MUCL39482 cds-NP_010920.3_MUCL39482 99.3 100.0 Verified 1 1 1 False True False False False
MUCL42920 GCA_001738485.1 Bread Europe CM005427.1:159457-161349:+ gene-YER005W_MUCL42920 rna-NM_001178896.3_MUCL42920 cds-NP_010920.3_MUCL42920 99.5 100.0 Verified 1 1 1 False True False False False
NCIM3186 GCA_001029075.1 Bioethanol Asia CP011814.1:160549-162441:+ gene-YER005W_NCIM3186 rna-NM_001178896.3_NCIM3186 cds-NP_010920.3_NCIM3186 99.4 100.0 Verified 1 1 1 False True False False False
NCYC1407 GCA_001738225.1 Sake Asia CM005267.1:158659-160551:+ gene-YER005W_NCYC1407 rna-NM_001178896.3_NCYC1407 cds-NP_010920.3_NCYC1407 99.4 100.0 Verified 1 1 1 False True False False False
PE2H3 GCA_905220325.1 Bioethanol South America HG994144.1:162960-164852:+ gene-YER005W_PE2H3 rna-NM_001178896.3_PE2H3 cds-NP_010920.3_PE2H3 99.6 100.0 Verified 1 1 1 False True False False False
PE2H4 GCA_905220315.1 Bioethanol South America LR999876.1:158875-160767:+ gene-YER005W_PE2H4 rna-NM_001178896.3_PE2H4 cds-NP_010920.3_PE2H4 99.6 100.0 Verified 1 1 1 False True False False False
S288C GCF_000146045.2 Laboratory Not applicable NC_001137.3:160550-162442:+ gene-YER005W_S288C rna-NM_001178896.3_S288C cds-NP_010920.3_S288C 100.0 100.0 Verified 1 1 1 True True False False False
SA1 GCA_004114265.1 Bioethanol South America SDIA01000020.1:81167-83059:- gene-YER005W_SA1 rna-NM_001178896.3_SA1 cds-NP_010920.3_SA1 99.5 100.0 Verified 1 1 1 False True False False False
ThermosaccDry GCA_001738605.1 Bioethanol Asia CM005491.1:155570-157462:+ gene-YER005W_ThermosaccDry rna-NM_001178896.3_ThermosaccDry cds-NP_010920.3_ThermosaccDry 99.5 100.0 Verified 1 1 1 False True False False False
VR1 GCA_001738595.1 Bioethanol South America CM005459.1:155051-156943:+ gene-YER005W_VR1 rna-NM_001178896.3_VR1 cds-NP_010920.3_VR1 99.6 100.0 Verified 1 1 1 False True False False False
ZTW1 GCA_000308935.1 Bioethanol Asia AMDD01000009.1:153599-155492:+ gene-YER005W_ZTW1 rna-NM_001178896.3_ZTW1 cds-NP_010920.3_ZTW1 99.5 100.0 Unannotated 1 1 0 False False False True False
Sparadoxus GCF_002079055.1 Not applicable Not applicable NC_047491.1:158307-160199:+ gene-YER005W_Sparadoxus rna-NM_001178896.3_Sparadoxus cds-NP_010920.3_Sparadoxus 90.5 99.8 Verified 1 1 1 False True False False False

Additional files