YNCP0017C (YNCP0017C)

Gene profile

Gene name: YNCP0017C
Reference locus (S288C): YNCP0017C
Gene biotype: tRNA

Description: Unknown

Top 10 interactors (score): Unknown

Homologues (species, bitscore): Unknown

External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser

Comparative analysis of strains

Search table

strain assembly application macro_region gene_coord geneID rnaID protID %id %cov_exon status copyNumber copyID nORFs match_ref_CDS validORF missing_startCodon missing_stopCodon outOfFrame_stopCodon
AKU4011 GCA_001738255.1 Sake Asia CM005310.1:741031-741126:- gene-YNCP0017C_AKU4011 rna-YNCP0017C_AKU4011 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
BG1 GCA_001932575.1 Bioethanol South America MSHP01000091.1:156687-156782:+ gene-YNCP0017C_BG1 rna-YNCP0017C_BG1 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
Bruggeman GCA_001738585.1 Bread Not Applicable CM005518.1:821392-821487:- gene-YNCP0017C_Bruggeman rna-YNCP0017C_Bruggeman Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
CAT1 GCA_001738705.1 Bioethanol South America CM005534.1:863341-863436:- gene-YNCP0017C_CAT1 rna-YNCP0017C_CAT1 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
CBS1585 GCA_001738375.1 Sake Asia CM005374.1:745288-745383:- gene-YNCP0017C_CBS1585 rna-YNCP0017C_CBS1585 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
CBS436 GCA_001738355.1 Sake Asia CM005358.1:759593-759688:- gene-YNCP0017C_CBS436 rna-YNCP0017C_CBS436 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
CBS6412 GCA_001738345.1 Sake Asia CM005342.1:748011-748106:- gene-YNCP0017C_CBS6412 rna-YNCP0017C_CBS6412 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
CBS6413 GCA_001738265.1 Sake Asia CM005326.1:742734-742829:- gene-YNCP0017C_CBS6413 rna-YNCP0017C_CBS6413 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
CENPK1137D GCA_000269885.1 Laboratory Not Applicable CM001537.1:769193-769288:- gene-YNCP0017C_CENPK1137D rna-YNCP0017C_CENPK1137D Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
EthanolRed GCA_001738615.1 Bioethanol Asia CM005486.1:1067642-1067737:- gene-YNCP0017C_EthanolRed rna-YNCP0017C_EthanolRed Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
FaliES1 GCA_001738715.1 Bioethanol Asia CM005550.1:747189-747284:- gene-YNCP0017C_FaliES1 rna-YNCP0017C_FaliES1 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
MUCL30387 GCA_001738515.1 Bread Europe CM005422.1:760926-761021:- gene-YNCP0017C_MUCL30387 rna-YNCP0017C_MUCL30387 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
MUCL30388 GCA_001738495.1 Bread Europe CM005454.1:759447-759542:- gene-YNCP0017C_MUCL30388 rna-YNCP0017C_MUCL30388 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
MUCL39482 GCA_001738235.1 Sake Asia CM005294.1:737795-737890:- gene-YNCP0017C_MUCL39482 rna-YNCP0017C_MUCL39482 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
MUCL42920 GCA_001738485.1 Bread Europe CM005437.1:440298-440393:+ gene-YNCP0017C_MUCL42920 rna-YNCP0017C_MUCL42920 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
NCYC1407 GCA_001738225.1 Sake Asia CM005278.1:746388-746483:- gene-YNCP0017C_NCYC1407 rna-YNCP0017C_NCYC1407 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
PE2H3 GCA_905220325.1 Bioethanol South America HG994155.1:752662-752757:- gene-YNCP0017C_PE2H3 rna-YNCP0017C_PE2H3 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
PE2H4 GCA_905220315.1 Bioethanol South America LR999887.1:752310-752405:- gene-YNCP0017C_PE2H4 rna-YNCP0017C_PE2H4 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
S288C GCF_000146045.2 Laboratory Not applicable NC_001148.4:769207-769302:- gene-YNCP0017C_S288C rna-YNCP0017C_S288C Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
SA1 GCA_004114265.1 Bioethanol South America SDIA01000028.1:67343-67438:- gene-YNCP0017C_SA1 rna-YNCP0017C_SA1 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
ThermosaccDry GCA_001738605.1 Bioethanol Asia CM005502.1:746634-746729:- gene-YNCP0017C_ThermosaccDry rna-YNCP0017C_ThermosaccDry Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
VR1 GCA_001738595.1 Bioethanol South America CM005470.1:763293-763388:- gene-YNCP0017C_VR1 rna-YNCP0017C_VR1 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
ZTW1 GCA_000308935.1 Bioethanol Asia AMDD01000033.1:745685-745780:- gene-YNCP0017C_ZTW1 rna-YNCP0017C_ZTW1 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
Sparadoxus GCF_002079055.1 Not applicable Not applicable NC_047502.1:746637-746732:- gene-YNCP0017C_Sparadoxus rna-YNCP0017C_Sparadoxus Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding

Additional files