YNCP0009W (YNCP0009W)


Gene profile

Gene name: YNCP0009W
Reference locus (S288C): YNCP0009W
Gene biotype: tRNA

Description: Unknown

Top 10 interactors (score): Unknown

Homologues (species, bitscore): Unknown

External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser


Comparative analysis of strains

Search table

strain assembly application macro_region gene_coord geneID rnaID protID %id %cov_exon status copyNumber copyID nORFs match_ref_CDS validORF missing_startCodon missing_stopCodon outOfFrame_stopCodon
CAT1 GCA_001738705.1 Bioethanol South America CM005534.1:663988-664058:+ gene-YNCP0009W_CAT1 rna-YNCP0009W_CAT1 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
CBS1585 GCA_001738375.1 Sake Asia CM005374.1:547554-547624:+ gene-YNCP0009W_CBS1585 rna-YNCP0009W_CBS1585 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
CBS6413 GCA_001738265.1 Sake Asia CM005326.1:544014-544084:+ gene-YNCP0009W_CBS6413 rna-YNCP0009W_CBS6413 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
MUCL30388 GCA_001738495.1 Bread Europe CM005454.1:561218-561288:+ gene-YNCP0009W_MUCL30388 rna-YNCP0009W_MUCL30388 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
MUCL39482 GCA_001738235.1 Sake Asia CM005294.1:540794-540864:+ gene-YNCP0009W_MUCL39482 rna-YNCP0009W_MUCL39482 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
NCIM3186 GCA_001029075.1 Bioethanol Asia CP011825.1:572252-572322:+ gene-YNCP0009W_NCIM3186 rna-YNCP0009W_NCIM3186 Unknown 98.5 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
NCYC1407 GCA_001738225.1 Sake Asia CM005278.1:548493-548563:+ gene-YNCP0009W_NCYC1407 rna-YNCP0009W_NCYC1407 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
PE2H3 GCA_905220325.1 Bioethanol South America HG994155.1:555447-555517:+ gene-YNCP0009W_PE2H3 rna-YNCP0009W_PE2H3 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
PE2H4 GCA_905220315.1 Bioethanol South America LR999887.1:555062-555132:+ gene-YNCP0009W_PE2H4 rna-YNCP0009W_PE2H4 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
S288C GCF_000146045.2 Laboratory Not applicable NC_001148.4:572269-572339:+ gene-YNCP0009W_S288C rna-YNCP0009W_S288C Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
ThermosaccDry GCA_001738605.1 Bioethanol Asia CM005502.1:549430-549500:+ gene-YNCP0009W_ThermosaccDry rna-YNCP0009W_ThermosaccDry Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
VR1 GCA_001738595.1 Bioethanol South America CM005470.1:565701-565771:+ gene-YNCP0009W_VR1 rna-YNCP0009W_VR1 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
Sparadoxus GCF_002079055.1 Not applicable Not applicable NC_047502.1:548850-548920:+ gene-YNCP0009W_Sparadoxus rna-YNCP0009W_Sparadoxus Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding

Additional files