YNCM0025C (YNCM0025C)

Gene profile

Gene name: YNCM0025C
Reference locus (S288C): YNCM0025C
Gene biotype: tRNA

Description: Unknown

Top 10 interactors (score): Unknown

Homologues (species, bitscore): Unknown

External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser

Comparative analysis of strains

Search table

strain assembly application macro_region gene_coord geneID rnaID protID %id %cov_exon status copyNumber copyID nORFs match_ref_CDS validORF missing_startCodon missing_stopCodon outOfFrame_stopCodon
AKU4011 GCA_001738255.1 Sake Asia CM005307.1:518569-518641:- gene-YNCM0025C_AKU4011 rna-YNCM0025C_AKU4011 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
Bruggeman GCA_001738585.1 Bread Not Applicable CM005515.1:460994-461066:- gene-YNCM0025C_Bruggeman rna-YNCM0025C_Bruggeman Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
CAT1 GCA_001738705.1 Bioethanol South America CM005531.1:461313-461385:- gene-YNCM0025C_CAT1 rna-YNCM0025C_CAT1 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
CBS1585 GCA_001738375.1 Sake Asia CM005371.1:451514-451586:- gene-YNCM0025C_CBS1585 rna-YNCM0025C_CBS1585 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
CBS436 GCA_001738355.1 Sake Asia CM005355.1:456827-456899:- gene-YNCM0025C_CBS436 rna-YNCM0025C_CBS436 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
CBS6412 GCA_001738345.1 Sake Asia CM005339.1:564613-564685:- gene-YNCM0025C_CBS6412 rna-YNCM0025C_CBS6412 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
CBS6413 GCA_001738265.1 Sake Asia CM005323.1:450774-450846:- gene-YNCM0025C_CBS6413 rna-YNCM0025C_CBS6413 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
EthanolRed GCA_001738615.1 Bioethanol Asia CM005483.1:451399-451471:- gene-YNCM0025C_EthanolRed rna-YNCM0025C_EthanolRed Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
FaliES1 GCA_001738715.1 Bioethanol Asia CM005547.1:454544-454616:- gene-YNCM0025C_FaliES1 rna-YNCM0025C_FaliES1 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
MUCL30387 GCA_001738515.1 Bread Europe CM005419.1:457913-457985:- gene-YNCM0025C_MUCL30387 rna-YNCM0025C_MUCL30387 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
MUCL30388 GCA_001738495.1 Bread Europe CM005451.1:461902-461974:- gene-YNCM0025C_MUCL30388 rna-YNCM0025C_MUCL30388 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
MUCL39482 GCA_001738235.1 Sake Asia CM005291.1:451812-451884:- gene-YNCM0025C_MUCL39482 rna-YNCM0025C_MUCL39482 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
MUCL42920 GCA_001738485.1 Bread Europe CM005435.1:458482-458554:- gene-YNCM0025C_MUCL42920 rna-YNCM0025C_MUCL42920 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
NCIM3186 GCA_001029075.1 Bioethanol Asia CP011822.1:480575-480647:- gene-YNCM0025C_NCIM3186 rna-YNCM0025C_NCIM3186 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
PE2H3 GCA_905220325.1 Bioethanol South America HG994152.1:457425-457497:- gene-YNCM0025C_PE2H3 rna-YNCM0025C_PE2H3 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
PE2H4 GCA_905220315.1 Bioethanol South America LR999884.1:463520-463592:- gene-YNCM0025C_PE2H4 rna-YNCM0025C_PE2H4 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
S288C GCF_000146045.2 Laboratory Not applicable NC_001145.3:480621-480693:- gene-YNCM0025C_S288C rna-YNCM0025C_S288C Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
SA1 GCA_004114265.1 Bioethanol South America SDIA01000005.1:69305-69377:+ gene-YNCM0025C_SA1 rna-YNCM0025C_SA1 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
ThermosaccDry GCA_001738605.1 Bioethanol Asia CM005499.1:452366-452438:- gene-YNCM0025C_ThermosaccDry rna-YNCM0025C_ThermosaccDry Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
VR1 GCA_001738595.1 Bioethanol South America CM005467.1:464011-464083:- gene-YNCM0025C_VR1 rna-YNCM0025C_VR1 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
Sparadoxus GCF_002079055.1 Not applicable Not applicable NC_047499.1:464853-464925:- gene-YNCM0025C_Sparadoxus rna-YNCM0025C_Sparadoxus Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding

Additional files