YNCL0004C (YNCL0004C)

Gene profile

Gene name: YNCL0004C
Reference locus (S288C): YNCL0004C
Gene biotype: tRNA

Description: Unknown

Top 10 interactors (score): Unknown

Homologues (species, bitscore): Unknown

External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser

Comparative analysis of strains

Search table

strain assembly application macro_region gene_coord geneID rnaID protID %id %cov_exon status copyNumber copyID nORFs match_ref_CDS validORF missing_startCodon missing_stopCodon outOfFrame_stopCodon
AKU4011 GCA_001738255.1 Sake Asia CM005306.1:202818-202890:- gene-YNCL0004C_AKU4011 rna-YNCL0004C_AKU4011 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
BG1 GCA_001932575.1 Bioethanol South America MSHP01000212.1:166099-166171:- gene-YNCL0004C_BG1 rna-YNCL0004C_BG1 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
Bruggeman GCA_001738585.1 Bread Not Applicable CM005514.1:213210-213282:- gene-YNCL0004C_Bruggeman rna-YNCL0004C_Bruggeman Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
CAT1 GCA_001738705.1 Bioethanol South America CM005530.1:213536-213608:- gene-YNCL0004C_CAT1 rna-YNCL0004C_CAT1 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
CBS1585 GCA_001738375.1 Sake Asia CM005370.1:210444-210516:- gene-YNCL0004C_CBS1585 rna-YNCL0004C_CBS1585 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
CBS436 GCA_001738355.1 Sake Asia CM005354.1:201074-201146:- gene-YNCL0004C_CBS436 rna-YNCL0004C_CBS436 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
CBS6412 GCA_001738345.1 Sake Asia CM005338.1:208854-208926:- gene-YNCL0004C_CBS6412 rna-YNCL0004C_CBS6412 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
CBS6413 GCA_001738265.1 Sake Asia CM005322.1:210705-210777:- gene-YNCL0004C_CBS6413 rna-YNCL0004C_CBS6413 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
CENPK1137D GCA_000269885.1 Laboratory Not Applicable CM001533.1:200114-200186:- gene-YNCL0004C_CENPK1137D rna-YNCL0004C_CENPK1137D Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
EthanolRed GCA_001738615.1 Bioethanol Asia CM005482.1:202830-202902:- gene-YNCL0004C_EthanolRed rna-YNCL0004C_EthanolRed Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
FaliES1 GCA_001738715.1 Bioethanol Asia CM005546.1:202738-202810:- gene-YNCL0004C_FaliES1 rna-YNCL0004C_FaliES1 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
JAY291 GCA_000182315.2 Bioethanol South America ACFL01000431.1:46593-46665:- gene-YNCL0004C_JAY291 rna-YNCL0004C_JAY291 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
MUCL30387 GCA_001738515.1 Bread Europe CM005418.1:210563-210635:- gene-YNCL0004C_MUCL30387 rna-YNCL0004C_MUCL30387 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
MUCL30388 GCA_001738495.1 Bread Europe CM005450.1:217815-217887:- gene-YNCL0004C_MUCL30388 rna-YNCL0004C_MUCL30388 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
MUCL39482 GCA_001738235.1 Sake Asia CM005290.1:210939-211011:- gene-YNCL0004C_MUCL39482 rna-YNCL0004C_MUCL39482 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
MUCL42920 GCA_001738485.1 Bread Europe CM005434.1:210842-210914:- gene-YNCL0004C_MUCL42920 rna-YNCL0004C_MUCL42920 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
NCIM3186 GCA_001029075.1 Bioethanol Asia CP011821.1:214857-214929:- gene-YNCL0004C_NCIM3186 rna-YNCL0004C_NCIM3186 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
NCYC1407 GCA_001738225.1 Sake Asia CM005274.1:202998-203070:- gene-YNCL0004C_NCYC1407 rna-YNCL0004C_NCYC1407 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
PE2H3 GCA_905220325.1 Bioethanol South America HG994151.1:208872-208944:- gene-YNCL0004C_PE2H3 rna-YNCL0004C_PE2H3 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
PE2H4 GCA_905220315.1 Bioethanol South America LR999883.1:208613-208685:- gene-YNCL0004C_PE2H4 rna-YNCL0004C_PE2H4 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
S288C GCF_000146045.2 Laboratory Not applicable NC_001144.5:214883-214955:- gene-YNCL0004C_S288C rna-YNCL0004C_S288C Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
SA1 GCA_004114265.1 Bioethanol South America SDIA01000046.1:46719-46791:- gene-YNCL0004C_SA1 rna-YNCL0004C_SA1 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
ThermosaccDry GCA_001738605.1 Bioethanol Asia CM005498.1:202904-202976:- gene-YNCL0004C_ThermosaccDry rna-YNCL0004C_ThermosaccDry Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
VR1 GCA_001738595.1 Bioethanol South America CM005466.1:216321-216393:- gene-YNCL0004C_VR1 rna-YNCL0004C_VR1 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
ZTW1 GCA_000308935.1 Bioethanol Asia AMDD01000023.1:202270-202342:- gene-YNCL0004C_ZTW1 rna-YNCL0004C_ZTW1 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
Sparadoxus GCF_002079055.1 Not applicable Not applicable NC_047498.1:211050-211122:- gene-YNCL0004C_Sparadoxus rna-YNCL0004C_Sparadoxus Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding

Additional files