YNCL0002C (YNCL0002C)

Gene profile

Gene name: YNCL0002C
Reference locus (S288C): YNCL0002C
Gene biotype: tRNA

Description: Unknown

Top 10 interactors (score): Unknown

Homologues (species, bitscore): Unknown

External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser

Comparative analysis of strains

Search table

strain assembly application macro_region gene_coord geneID rnaID protID %id %cov_exon status copyNumber copyID nORFs match_ref_CDS validORF missing_startCodon missing_stopCodon outOfFrame_stopCodon
AKU4011 GCA_001738255.1 Sake Asia CM005306.1:155925-156006:- gene-YNCL0002C_AKU4011 rna-YNCL0002C_AKU4011 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
BG1 GCA_001932575.1 Bioethanol South America MSHP01000212.1:119127-119208:- gene-YNCL0002C_BG1 rna-YNCL0002C_BG1 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
Bruggeman GCA_001738585.1 Bread Not Applicable CM005514.1:166295-166376:- gene-YNCL0002C_Bruggeman rna-YNCL0002C_Bruggeman Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
CAT1 GCA_001738705.1 Bioethanol South America CM005530.1:166614-166695:- gene-YNCL0002C_CAT1 rna-YNCL0002C_CAT1 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
CBS1585 GCA_001738375.1 Sake Asia CM005370.1:163523-163604:- gene-YNCL0002C_CBS1585 rna-YNCL0002C_CBS1585 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
CBS436 GCA_001738355.1 Sake Asia CM005354.1:154147-154228:- gene-YNCL0002C_CBS436 rna-YNCL0002C_CBS436 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
CBS6412 GCA_001738345.1 Sake Asia CM005338.1:162294-162375:- gene-YNCL0002C_CBS6412 rna-YNCL0002C_CBS6412 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
CBS6413 GCA_001738265.1 Sake Asia CM005322.1:163790-163871:- gene-YNCL0002C_CBS6413 rna-YNCL0002C_CBS6413 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
CENPK1137D GCA_000269885.1 Laboratory Not Applicable CM001533.1:153206-153287:- gene-YNCL0002C_CENPK1137D rna-YNCL0002C_CENPK1137D Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
EthanolRed GCA_001738615.1 Bioethanol Asia CM005482.1:155944-156025:- gene-YNCL0002C_EthanolRed rna-YNCL0002C_EthanolRed Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
FaliES1 GCA_001738715.1 Bioethanol Asia CM005546.1:155515-155596:- gene-YNCL0002C_FaliES1 rna-YNCL0002C_FaliES1 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
JAY291 GCA_000182315.2 Bioethanol South America ACFL01000083.1:4-85:+ gene-YNCL0002C_JAY291 rna-YNCL0002C_JAY291 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
MUCL30387 GCA_001738515.1 Bread Europe CM005418.1:163651-163732:- gene-YNCL0002C_MUCL30387 rna-YNCL0002C_MUCL30387 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
MUCL30388 GCA_001738495.1 Bread Europe CM005450.1:169348-169429:- gene-YNCL0002C_MUCL30388 rna-YNCL0002C_MUCL30388 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
MUCL39482 GCA_001738235.1 Sake Asia CM005290.1:163995-164076:- gene-YNCL0002C_MUCL39482 rna-YNCL0002C_MUCL39482 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
MUCL42920 GCA_001738485.1 Bread Europe CM005434.1:163920-164001:- gene-YNCL0002C_MUCL42920 rna-YNCL0002C_MUCL42920 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
NCIM3186 GCA_001029075.1 Bioethanol Asia CP011821.1:167918-167999:- gene-YNCL0002C_NCIM3186 rna-YNCL0002C_NCIM3186 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
NCYC1407 GCA_001738225.1 Sake Asia CM005274.1:155598-155679:- gene-YNCL0002C_NCYC1407 rna-YNCL0002C_NCYC1407 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
PE2H3 GCA_905220325.1 Bioethanol South America HG994151.1:161937-162018:- gene-YNCL0002C_PE2H3 rna-YNCL0002C_PE2H3 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
PE2H4 GCA_905220315.1 Bioethanol South America LR999883.1:161678-161759:- gene-YNCL0002C_PE2H4 rna-YNCL0002C_PE2H4 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
S288C GCF_000146045.2 Laboratory Not applicable NC_001144.5:167944-168025:- gene-YNCL0002C_S288C rna-YNCL0002C_S288C Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
SA1 GCA_004114265.1 Bioethanol South America SDIA01000062.1:71136-71217:- gene-YNCL0002C_SA1 rna-YNCL0002C_SA1 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
ThermosaccDry GCA_001738605.1 Bioethanol Asia CM005498.1:156018-156099:- gene-YNCL0002C_ThermosaccDry rna-YNCL0002C_ThermosaccDry Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
VR1 GCA_001738595.1 Bioethanol South America CM005466.1:169390-169471:- gene-YNCL0002C_VR1 rna-YNCL0002C_VR1 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
ZTW1 GCA_000308935.1 Bioethanol Asia AMDD01000023.1:155350-155431:- gene-YNCL0002C_ZTW1 rna-YNCL0002C_ZTW1 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
Sparadoxus GCF_002079055.1 Not applicable Not applicable NC_047487.1:167406-167487:- gene-YNCL0002C_Sparadoxus rna-YNCL0002C_Sparadoxus Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding

Additional files