YNCL0001W (YNCL0001W)

Gene profile

Gene name: YNCL0001W
Reference locus (S288C): YNCL0001W
Gene biotype: tRNA

Description: Unknown

Top 10 interactors (score): Unknown

Homologues (species, bitscore): Unknown

External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser

Comparative analysis of strains

Search table

strain assembly application macro_region gene_coord geneID rnaID protID %id %cov_exon status copyNumber copyID nORFs match_ref_CDS validORF missing_startCodon missing_stopCodon outOfFrame_stopCodon
AKU4011 GCA_001738255.1 Sake Asia CM005306.1:79711-79813:+ gene-YNCL0001W_AKU4011 rna-YNCL0001W_AKU4011 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
BG1 GCA_001932575.1 Bioethanol South America MSHP01000212.1:43657-43759:+ gene-YNCL0001W_BG1 rna-YNCL0001W_BG1 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
Bruggeman GCA_001738585.1 Bread Not Applicable CM005514.1:89962-90064:+ gene-YNCL0001W_Bruggeman rna-YNCL0001W_Bruggeman Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
CAT1 GCA_001738705.1 Bioethanol South America CM005530.1:90580-90682:+ gene-YNCL0001W_CAT1 rna-YNCL0001W_CAT1 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
CBS1585 GCA_001738375.1 Sake Asia CM005370.1:87409-87511:+ gene-YNCL0001W_CBS1585 rna-YNCL0001W_CBS1585 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
CBS436 GCA_001738355.1 Sake Asia CM005354.1:77607-77709:+ gene-YNCL0001W_CBS436 rna-YNCL0001W_CBS436 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
CBS6412 GCA_001738345.1 Sake Asia CM005338.1:87326-87428:+ gene-YNCL0001W_CBS6412 rna-YNCL0001W_CBS6412 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
CBS6413 GCA_001738265.1 Sake Asia CM005322.1:87418-87520:+ gene-YNCL0001W_CBS6413 rna-YNCL0001W_CBS6413 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
CENPK1137D GCA_000269885.1 Laboratory Not Applicable CM001533.1:77553-77655:+ gene-YNCL0001W_CENPK1137D rna-YNCL0001W_CENPK1137D Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
EthanolRed GCA_001738615.1 Bioethanol Asia CM005482.1:80105-80207:+ gene-YNCL0001W_EthanolRed rna-YNCL0001W_EthanolRed Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
FaliES1 GCA_001738715.1 Bioethanol Asia CM005546.1:79419-79521:+ gene-YNCL0001W_FaliES1 rna-YNCL0001W_FaliES1 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
JAY291 GCA_000182315.2 Bioethanol South America ACFL01000062.1:2229-2331:- gene-YNCL0001W_JAY291 rna-YNCL0001W_JAY291 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
MUCL30387 GCA_001738515.1 Bread Europe CM005418.1:87376-87478:+ gene-YNCL0001W_MUCL30387 rna-YNCL0001W_MUCL30387 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
MUCL30388 GCA_001738495.1 Bread Europe CM005450.1:92104-92206:+ gene-YNCL0001W_MUCL30388 rna-YNCL0001W_MUCL30388 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
MUCL39482 GCA_001738235.1 Sake Asia CM005290.1:87618-87720:+ gene-YNCL0001W_MUCL39482 rna-YNCL0001W_MUCL39482 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
MUCL42920 GCA_001738485.1 Bread Europe CM005434.1:87712-87814:+ gene-YNCL0001W_MUCL42920 rna-YNCL0001W_MUCL42920 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
NCIM3186 GCA_001029075.1 Bioethanol Asia CP011821.1:92522-92624:+ gene-YNCL0001W_NCIM3186 rna-YNCL0001W_NCIM3186 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
NCYC1407 GCA_001738225.1 Sake Asia CM005274.1:79484-79586:+ gene-YNCL0001W_NCYC1407 rna-YNCL0001W_NCYC1407 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
PE2H3 GCA_905220325.1 Bioethanol South America HG994151.1:86168-86270:+ gene-YNCL0001W_PE2H3 rna-YNCL0001W_PE2H3 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
PE2H4 GCA_905220315.1 Bioethanol South America LR999883.1:85976-86078:+ gene-YNCL0001W_PE2H4 rna-YNCL0001W_PE2H4 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
S288C GCF_000146045.2 Laboratory Not applicable NC_001144.5:92548-92650:+ gene-YNCL0001W_S288C rna-YNCL0001W_S288C Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
SA1 GCA_004114265.1 Bioethanol South America SDIA01000047.1:86138-86240:+ gene-YNCL0001W_SA1 rna-YNCL0001W_SA1 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
ThermosaccDry GCA_001738605.1 Bioethanol Asia CM005498.1:79925-80027:+ gene-YNCL0001W_ThermosaccDry rna-YNCL0001W_ThermosaccDry Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
VR1 GCA_001738595.1 Bioethanol South America CM005466.1:93986-94088:+ gene-YNCL0001W_VR1 rna-YNCL0001W_VR1 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
ZTW1 GCA_000308935.1 Bioethanol Asia AMDD01000023.1:79494-79596:+ gene-YNCL0001W_ZTW1 rna-YNCL0001W_ZTW1 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
Sparadoxus GCF_002079055.1 Not applicable Not applicable NC_047501.1:292492-292593:+ gene-YNCL0001W_Sparadoxus rna-YNCL0001W_Sparadoxus Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding

Additional files