YNCK0005C (YNCK0005C)

Gene profile

Gene name: YNCK0005C
Reference locus (S288C): YNCK0005C
Gene biotype: tRNA

Description: Unknown

Top 10 interactors (score): Unknown

Homologues (species, bitscore): Unknown

External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser

Comparative analysis of strains

Search table

strain assembly application macro_region gene_coord geneID rnaID protID %id %cov_exon status copyNumber copyID nORFs match_ref_CDS validORF missing_startCodon missing_stopCodon outOfFrame_stopCodon
AKU4011 GCA_001738255.1 Sake Asia CM005305.1:127871-127942:- gene-YNCK0005C_AKU4011 rna-YNCK0005C_AKU4011 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
Bruggeman GCA_001738585.1 Bread Not Applicable CM005513.1:145265-145336:- gene-YNCK0005C_Bruggeman rna-YNCK0005C_Bruggeman Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
CAT1 GCA_001738705.1 Bioethanol South America CM005529.1:140219-140290:- gene-YNCK0005C_CAT1 rna-YNCK0005C_CAT1 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
CBS1585 GCA_001738375.1 Sake Asia CM005369.1:139855-139926:- gene-YNCK0005C_CBS1585 rna-YNCK0005C_CBS1585 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
CBS6412 GCA_001738345.1 Sake Asia CM005337.1:125449-125520:- gene-YNCK0005C_CBS6412 rna-YNCK0005C_CBS6412 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
CBS6413 GCA_001738265.1 Sake Asia CM005321.1:140571-140642:- gene-YNCK0005C_CBS6413 rna-YNCK0005C_CBS6413 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
EthanolRed GCA_001738615.1 Bioethanol Asia CM005481.1:138768-138839:- gene-YNCK0005C_EthanolRed rna-YNCK0005C_EthanolRed Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
FaliES1 GCA_001738715.1 Bioethanol Asia CM005545.1:139469-139540:- gene-YNCK0005C_FaliES1 rna-YNCK0005C_FaliES1 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
MUCL30387 GCA_001738515.1 Bread Europe CM005417.1:147556-147627:- gene-YNCK0005C_MUCL30387 rna-YNCK0005C_MUCL30387 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
MUCL30388 GCA_001738495.1 Bread Europe CM005449.1:141909-141980:- gene-YNCK0005C_MUCL30388 rna-YNCK0005C_MUCL30388 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
MUCL39482 GCA_001738235.1 Sake Asia CM005289.1:139910-139981:- gene-YNCK0005C_MUCL39482 rna-YNCK0005C_MUCL39482 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
MUCL42920 GCA_001738485.1 Bread Europe CM005433.1:144241-144312:- gene-YNCK0005C_MUCL42920 rna-YNCK0005C_MUCL42920 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
NCIM3186 GCA_001029075.1 Bioethanol Asia CP011820.1:141007-141078:- gene-YNCK0005C_NCIM3186 rna-YNCK0005C_NCIM3186 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
NCYC1407 GCA_001738225.1 Sake Asia CM005273.1:139934-140005:- gene-YNCK0005C_NCYC1407 rna-YNCK0005C_NCYC1407 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
PE2H3 GCA_905220325.1 Bioethanol South America HG994150.1:146992-147063:- gene-YNCK0005C_PE2H3 rna-YNCK0005C_PE2H3 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
PE2H4 GCA_905220315.1 Bioethanol South America LR999882.1:143286-143357:- gene-YNCK0005C_PE2H4 rna-YNCK0005C_PE2H4 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
S288C GCF_000146045.2 Laboratory Not applicable NC_001143.9:141018-141089:- gene-YNCK0005C_S288C rna-YNCK0005C_S288C Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
SA1 GCA_004114265.1 Bioethanol South America SDIA01000008.1:57216-57287:- gene-YNCK0005C_SA1 rna-YNCK0005C_SA1 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
ThermosaccDry GCA_001738605.1 Bioethanol Asia CM005497.1:140169-140240:- gene-YNCK0005C_ThermosaccDry rna-YNCK0005C_ThermosaccDry Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
VR1 GCA_001738595.1 Bioethanol South America CM005465.1:138695-138766:- gene-YNCK0005C_VR1 rna-YNCK0005C_VR1 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
Sparadoxus GCF_002079055.1 Not applicable Not applicable NC_047497.1:153196-153267:- gene-YNCK0005C_Sparadoxus rna-YNCK0005C_Sparadoxus Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding

Additional files