YNCK0004W (YNCK0004W)

Gene profile

Gene name: YNCK0004W
Reference locus (S288C): YNCK0004W
Gene biotype: tRNA

Description: Unknown

Top 10 interactors (score): Unknown

Homologues (species, bitscore): Unknown

External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser

Comparative analysis of strains

Search table

strain assembly application macro_region gene_coord geneID rnaID protID %id %cov_exon status copyNumber copyID nORFs match_ref_CDS validORF missing_startCodon missing_stopCodon outOfFrame_stopCodon
AKU4011 GCA_001738255.1 Sake Asia CM005305.1:71061-71144:+ gene-YNCK0004W_AKU4011 rna-YNCK0004W_AKU4011 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
BG1 GCA_001932575.1 Bioethanol South America MSHP01000102.1:50419-50502:- gene-YNCK0004W_BG1 rna-YNCK0004W_BG1 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
Bruggeman GCA_001738585.1 Bread Not Applicable CM005506.1:527943-528026:+ gene-YNCK0004W_Bruggeman rna-YNCK0004W_Bruggeman Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
CAT1 GCA_001738705.1 Bioethanol South America CM005522.1:512669-512752:+ gene-YNCK0004W_CAT1 rna-YNCK0004W_CAT1 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
CBS1585 GCA_001738375.1 Sake Asia CM005369.1:83043-83126:+ gene-YNCK0004W_CBS1585 rna-YNCK0004W_CBS1585 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
CBS436 GCA_001738355.1 Sake Asia CM005346.1:513274-513357:+ gene-YNCK0004W_CBS436 rna-YNCK0004W_CBS436 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
CBS6412 GCA_001738345.1 Sake Asia CM005337.1:68634-68717:+ gene-YNCK0004W_CBS6412 rna-YNCK0004W_CBS6412 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
CBS6413 GCA_001738265.1 Sake Asia CM005321.1:83762-83845:+ gene-YNCK0004W_CBS6413 rna-YNCK0004W_CBS6413 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
EthanolRed GCA_001738615.1 Bioethanol Asia CM005481.1:81948-82031:+ gene-YNCK0004W_EthanolRed rna-YNCK0004W_EthanolRed Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
FaliES1 GCA_001738715.1 Bioethanol Asia CM005545.1:82649-82732:+ gene-YNCK0004W_FaliES1 rna-YNCK0004W_FaliES1 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
JAY291 GCA_000182315.2 Bioethanol South America ACFL01000006.2:81632-81715:+ gene-YNCK0004W_JAY291 rna-YNCK0004W_JAY291 Unknown 98.8 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
MUCL30387 GCA_001738515.1 Bread Europe CM005410.1:513521-513604:+ gene-YNCK0004W_MUCL30387 rna-YNCK0004W_MUCL30387 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
MUCL30388 GCA_001738495.1 Bread Europe CM005449.1:85089-85172:+ gene-YNCK0004W_MUCL30388 rna-YNCK0004W_MUCL30388 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
MUCL39482 GCA_001738235.1 Sake Asia CM005289.1:83100-83183:+ gene-YNCK0004W_MUCL39482 rna-YNCK0004W_MUCL39482 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
MUCL42920 GCA_001738485.1 Bread Europe CM005433.1:87433-87516:+ gene-YNCK0004W_MUCL42920 rna-YNCK0004W_MUCL42920 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
NCIM3186 GCA_001029075.1 Bioethanol Asia CP011820.1:84197-84280:+ gene-YNCK0004W_NCIM3186 rna-YNCK0004W_NCIM3186 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
NCYC1407 GCA_001738225.1 Sake Asia CM005273.1:83124-83207:+ gene-YNCK0004W_NCYC1407 rna-YNCK0004W_NCYC1407 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
PE2H3 GCA_905220325.1 Bioethanol South America HG994150.1:90173-90256:+ gene-YNCK0004W_PE2H3 rna-YNCK0004W_PE2H3 Unknown 98.8 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
PE2H4 GCA_905220315.1 Bioethanol South America LR999882.1:86467-86550:+ gene-YNCK0004W_PE2H4 rna-YNCK0004W_PE2H4 Unknown 98.8 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
S288C GCF_000146045.2 Laboratory Not applicable NC_001143.9:84208-84291:+ gene-YNCK0004W_S288C rna-YNCK0004W_S288C Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
SA1 GCA_004114265.1 Bioethanol South America SDIA01000008.1:412-495:+ gene-YNCK0004W_SA1 rna-YNCK0004W_SA1 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
ThermosaccDry GCA_001738605.1 Bioethanol Asia CM005497.1:83349-83432:+ gene-YNCK0004W_ThermosaccDry rna-YNCK0004W_ThermosaccDry Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
VR1 GCA_001738595.1 Bioethanol South America CM005456.1:6031-6114:+ gene-YNCK0004W_VR1 rna-YNCK0004W_VR1 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
ZTW1 GCA_000308935.1 Bioethanol Asia AMDD01000006.1:511082-511165:+ gene-YNCK0004W_ZTW1 rna-YNCK0004W_ZTW1 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
Sparadoxus GCF_002079055.1 Not applicable Not applicable NC_047497.1:96325-96408:+ gene-YNCK0004W_Sparadoxus rna-YNCK0004W_Sparadoxus Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding

Additional files