YNCJ0029W (YNCJ0029W)

Gene profile

Gene name: YNCJ0029W
Reference locus (S288C): YNCJ0029W
Gene biotype: tRNA

Description: Unknown

Top 10 interactors (score): Unknown

Homologues (species, bitscore): Unknown

External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser

Comparative analysis of strains

Search table

strain assembly application macro_region gene_coord geneID rnaID protID %id %cov_exon status copyNumber copyID nORFs match_ref_CDS validORF missing_startCodon missing_stopCodon outOfFrame_stopCodon
AKU4011 GCA_001738255.1 Sake Asia CM005304.1:589418-589518:+ gene-YNCJ0029W_AKU4011 rna-YNCJ0029W_AKU4011 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
BG1 GCA_001932575.1 Bioethanol South America MSHP01000190.1:18055-18155:- gene-YNCJ0029W_BG1 rna-YNCJ0029W_BG1 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
Bruggeman GCA_001738585.1 Bread Not Applicable CM005512.1:605151-605251:+ gene-YNCJ0029W_Bruggeman rna-YNCJ0029W_Bruggeman Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
CAT1 GCA_001738705.1 Bioethanol South America CM005528.1:608393-608493:+ gene-YNCJ0029W_1_CAT1 Unknown Unknown 100.0 100.0 Unannotated 2 2 0 Unknown Unknown non_coding non_coding non_coding
CAT1 GCA_001738705.1 Bioethanol South America CM005528.1:607570-607670:+ gene-YNCJ0029W_CAT1 rna-YNCJ0029W_CAT1 Unknown 100.0 100.0 Unannotated 2 1 0 Unknown False non_coding non_coding non_coding
CBS1585 GCA_001738375.1 Sake Asia CM005368.1:601483-601583:+ gene-YNCJ0029W_CBS1585 rna-YNCJ0029W_CBS1585 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
CBS436 GCA_001738355.1 Sake Asia CM005352.1:619589-619689:+ gene-YNCJ0029W_CBS436 rna-YNCJ0029W_CBS436 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
CBS6412 GCA_001738345.1 Sake Asia CM005336.1:588630-588730:+ gene-YNCJ0029W_CBS6412 rna-YNCJ0029W_CBS6412 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
CBS6413 GCA_001738265.1 Sake Asia CM005320.1:590891-590991:+ gene-YNCJ0029W_CBS6413 rna-YNCJ0029W_CBS6413 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
CENPK1137D GCA_000269885.1 Laboratory Not Applicable CM001531.1:600236-600336:+ gene-YNCJ0029W_CENPK1137D rna-YNCJ0029W_CENPK1137D Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
EthanolRed GCA_001738615.1 Bioethanol Asia CM005480.1:593835-593935:+ gene-YNCJ0029W_EthanolRed rna-YNCJ0029W_EthanolRed Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
FaliES1 GCA_001738715.1 Bioethanol Asia CM005544.1:605301-605401:+ gene-YNCJ0029W_FaliES1 rna-YNCJ0029W_FaliES1 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
JAY291 GCA_000182315.2 Bioethanol South America ACFL01000054.1:84016-84116:- gene-YNCJ0029W_JAY291 rna-YNCJ0029W_JAY291 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
MUCL30387 GCA_001738515.1 Bread Europe CM005416.1:603704-603804:+ gene-YNCJ0029W_MUCL30387 rna-YNCJ0029W_MUCL30387 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
MUCL30388 GCA_001738495.1 Bread Europe CM005448.1:601670-601770:+ gene-YNCJ0029W_1_MUCL30388 Unknown Unknown 100.0 100.0 Unannotated 2 2 0 Unknown Unknown non_coding non_coding non_coding
MUCL30388 GCA_001738495.1 Bread Europe CM005448.1:601016-601116:+ gene-YNCJ0029W_MUCL30388 rna-YNCJ0029W_MUCL30388 Unknown 100.0 100.0 Unannotated 2 1 0 Unknown False non_coding non_coding non_coding
MUCL39482 GCA_001738235.1 Sake Asia CM005288.1:594942-595042:+ gene-YNCJ0029W_MUCL39482 rna-YNCJ0029W_MUCL39482 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
MUCL42920 GCA_001738485.1 Bread Europe CM005434.1:583886-583986:- gene-YNCJ0029W_1_MUCL42920 Unknown Unknown 100.0 100.0 Unannotated 3 2 0 Unknown Unknown non_coding non_coding non_coding
MUCL42920 GCA_001738485.1 Bread Europe MBVV01000302.1:380-480:+ gene-YNCJ0029W_2_MUCL42920 Unknown Unknown 100.0 100.0 Unannotated 3 3 0 Unknown Unknown non_coding non_coding non_coding
MUCL42920 GCA_001738485.1 Bread Europe CM005432.1:599197-599297:+ gene-YNCJ0029W_MUCL42920 rna-YNCJ0029W_MUCL42920 Unknown 100.0 100.0 Unannotated 3 1 0 Unknown False non_coding non_coding non_coding
NCIM3186 GCA_001029075.1 Bioethanol Asia CP011819.1:617898-617998:+ gene-YNCJ0029W_NCIM3186 rna-YNCJ0029W_NCIM3186 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
NCYC1407 GCA_001738225.1 Sake Asia CM005272.1:592509-592609:+ gene-YNCJ0029W_NCYC1407 rna-YNCJ0029W_NCYC1407 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
PE2H3 GCA_905220325.1 Bioethanol South America HG994149.1:610402-610502:+ gene-YNCJ0029W_PE2H3 rna-YNCJ0029W_PE2H3 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
PE2H4 GCA_905220315.1 Bioethanol South America LR999881.1:604091-604191:+ gene-YNCJ0029W_PE2H4 rna-YNCJ0029W_PE2H4 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
S288C GCF_000146045.2 Laboratory Not applicable NC_001142.9:617919-618019:+ gene-YNCJ0029W_S288C rna-YNCJ0029W_S288C Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
SA1 GCA_004114265.1 Bioethanol South America SDIA01000038.1:76489-76589:+ gene-YNCJ0029W_SA1 rna-YNCJ0029W_SA1 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
ThermosaccDry GCA_001738605.1 Bioethanol Asia CM005496.1:599235-599335:+ gene-YNCJ0029W_ThermosaccDry rna-YNCJ0029W_ThermosaccDry Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
VR1 GCA_001738595.1 Bioethanol South America CM005464.1:601362-601462:+ gene-YNCJ0029W_VR1 rna-YNCJ0029W_VR1 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
ZTW1 GCA_000308935.1 Bioethanol Asia AMDD01000021.1:578602-578702:+ gene-YNCJ0029W_ZTW1 rna-YNCJ0029W_ZTW1 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
Sparadoxus GCF_002079055.1 Not applicable Not applicable NC_047496.1:612403-612503:+ gene-YNCJ0029W_Sparadoxus rna-YNCJ0029W_Sparadoxus Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding

Additional files