YNCJ0008W (YNCJ0008W)

Gene profile

Gene name: YNCJ0008W
Reference locus (S288C): YNCJ0008W
Gene biotype: tRNA

Description: Unknown

Top 10 interactors (score): Unknown

Homologues (species, bitscore): Unknown

External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser

Comparative analysis of strains

Search table

strain assembly application macro_region gene_coord geneID rnaID protID %id %cov_exon status copyNumber copyID nORFs match_ref_CDS validORF missing_startCodon missing_stopCodon outOfFrame_stopCodon
AKU4011 GCA_001738255.1 Sake Asia CM005304.1:216678-216750:+ gene-YNCJ0008W_AKU4011 rna-YNCJ0008W_AKU4011 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
BG1 GCA_001932575.1 Bioethanol South America MSHP01000190.1:397703-397775:- gene-YNCJ0008W_BG1 rna-YNCJ0008W_BG1 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
Bruggeman GCA_001738585.1 Bread Not Applicable CM005512.1:228104-228176:+ gene-YNCJ0008W_Bruggeman rna-YNCJ0008W_Bruggeman Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
CAT1 GCA_001738705.1 Bioethanol South America CM005528.1:233019-233091:+ gene-YNCJ0008W_CAT1 rna-YNCJ0008W_CAT1 Unknown 98.6 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
CBS1585 GCA_001738375.1 Sake Asia CM005368.1:228339-228411:+ gene-YNCJ0008W_CBS1585 rna-YNCJ0008W_CBS1585 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
CBS436 GCA_001738355.1 Sake Asia CM005352.1:246428-246500:+ gene-YNCJ0008W_CBS436 rna-YNCJ0008W_CBS436 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
CBS6412 GCA_001738345.1 Sake Asia CM005336.1:217435-217507:+ gene-YNCJ0008W_CBS6412 rna-YNCJ0008W_CBS6412 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
CBS6413 GCA_001738265.1 Sake Asia CM005320.1:218791-218863:+ gene-YNCJ0008W_CBS6413 rna-YNCJ0008W_CBS6413 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
CENPK1137D GCA_000269885.1 Laboratory Not Applicable CM001531.1:216393-216465:+ gene-YNCJ0008W_CENPK1137D rna-YNCJ0008W_CENPK1137D Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
EthanolRed GCA_001738615.1 Bioethanol Asia CM005480.1:220527-220599:+ gene-YNCJ0008W_EthanolRed rna-YNCJ0008W_EthanolRed Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
FaliES1 GCA_001738715.1 Bioethanol Asia CM005544.1:232104-232176:+ gene-YNCJ0008W_FaliES1 rna-YNCJ0008W_FaliES1 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
JAY291 GCA_000182315.2 Bioethanol South America ACFL01000138.1:29720-29792:+ gene-YNCJ0008W_JAY291 rna-YNCJ0008W_JAY291 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
MUCL30387 GCA_001738515.1 Bread Europe CM005416.1:230371-230443:+ gene-YNCJ0008W_MUCL30387 rna-YNCJ0008W_MUCL30387 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
MUCL30388 GCA_001738495.1 Bread Europe CM005448.1:226450-226522:+ gene-YNCJ0008W_MUCL30388 rna-YNCJ0008W_MUCL30388 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
MUCL39482 GCA_001738235.1 Sake Asia CM005288.1:221096-221168:+ gene-YNCJ0008W_MUCL39482 rna-YNCJ0008W_MUCL39482 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
MUCL42920 GCA_001738485.1 Bread Europe CM005432.1:227278-227350:+ gene-YNCJ0008W_MUCL42920 rna-YNCJ0008W_MUCL42920 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
NCIM3186 GCA_001029075.1 Bioethanol Asia CP011819.1:233918-233990:+ gene-YNCJ0008W_NCIM3186 rna-YNCJ0008W_NCIM3186 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
NCYC1407 GCA_001738225.1 Sake Asia CM005272.1:219785-219857:+ gene-YNCJ0008W_NCYC1407 rna-YNCJ0008W_NCYC1407 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
PE2H3 GCA_905220325.1 Bioethanol South America HG994149.1:232145-232217:+ gene-YNCJ0008W_PE2H3 rna-YNCJ0008W_PE2H3 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
PE2H4 GCA_905220315.1 Bioethanol South America LR999881.1:231789-231861:+ gene-YNCJ0008W_PE2H4 rna-YNCJ0008W_PE2H4 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
S288C GCF_000146045.2 Laboratory Not applicable NC_001142.9:233939-234011:+ gene-YNCJ0008W_S288C rna-YNCJ0008W_S288C Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
SA1 GCA_004114265.1 Bioethanol South America SDIA01000003.1:29663-29735:+ gene-YNCJ0008W_SA1 rna-YNCJ0008W_SA1 Unknown 98.6 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
ThermosaccDry GCA_001738605.1 Bioethanol Asia CM005496.1:225513-225585:+ gene-YNCJ0008W_ThermosaccDry rna-YNCJ0008W_ThermosaccDry Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
VR1 GCA_001738595.1 Bioethanol South America CM005464.1:225924-225996:+ gene-YNCJ0008W_VR1 rna-YNCJ0008W_VR1 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
ZTW1 GCA_000308935.1 Bioethanol Asia AMDD01000021.1:206872-206944:+ gene-YNCJ0008W_ZTW1 rna-YNCJ0008W_ZTW1 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
Sparadoxus GCF_002079055.1 Not applicable Not applicable NC_047496.1:230941-231013:+ gene-YNCJ0008W_Sparadoxus rna-YNCJ0008W_Sparadoxus Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding

Additional files