YNCJ0005C (YNCJ0005C)

Gene profile

Gene name: YNCJ0005C
Reference locus (S288C): YNCJ0005C
Gene biotype: tRNA

Description: Unknown

Top 10 interactors (score): Unknown

Homologues (species, bitscore): Unknown

External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser

Comparative analysis of strains

Search table

strain assembly application macro_region gene_coord geneID rnaID protID %id %cov_exon status copyNumber copyID nORFs match_ref_CDS validORF missing_startCodon missing_stopCodon outOfFrame_stopCodon
AKU4011 GCA_001738255.1 Sake Asia CM005304.1:185632-185704:- gene-YNCJ0005C_AKU4011 rna-YNCJ0005C_AKU4011 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
BG1 GCA_001932575.1 Bioethanol South America MSHP01000190.1:428057-428129:+ gene-YNCJ0005C_BG1 rna-YNCJ0005C_BG1 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
Bruggeman GCA_001738585.1 Bread Not Applicable CM005512.1:197677-197749:- gene-YNCJ0005C_Bruggeman rna-YNCJ0005C_Bruggeman Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
CAT1 GCA_001738705.1 Bioethanol South America CM005528.1:201734-201806:- gene-YNCJ0005C_CAT1 rna-YNCJ0005C_CAT1 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
CBS1585 GCA_001738375.1 Sake Asia CM005368.1:191265-191337:- gene-YNCJ0005C_CBS1585 rna-YNCJ0005C_CBS1585 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
CBS436 GCA_001738355.1 Sake Asia CM005352.1:216002-216074:- gene-YNCJ0005C_CBS436 rna-YNCJ0005C_CBS436 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
CBS6412 GCA_001738345.1 Sake Asia CM005336.1:187286-187358:- gene-YNCJ0005C_CBS6412 rna-YNCJ0005C_CBS6412 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
CBS6413 GCA_001738265.1 Sake Asia CM005320.1:188740-188812:- gene-YNCJ0005C_CBS6413 rna-YNCJ0005C_CBS6413 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
CENPK1137D GCA_000269885.1 Laboratory Not Applicable CM001531.1:179779-179851:- gene-YNCJ0005C_CENPK1137D rna-YNCJ0005C_CENPK1137D Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
EthanolRed GCA_001738615.1 Bioethanol Asia CM005480.1:189596-189668:- gene-YNCJ0005C_EthanolRed rna-YNCJ0005C_EthanolRed Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
FaliES1 GCA_001738715.1 Bioethanol Asia CM005544.1:195252-195324:- gene-YNCJ0005C_FaliES1 rna-YNCJ0005C_FaliES1 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
JAY291 GCA_000182315.2 Bioethanol South America ACFL01000136.1:31122-31194:+ gene-YNCJ0005C_JAY291 rna-YNCJ0005C_JAY291 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
MUCL30387 GCA_001738515.1 Bread Europe CM005416.1:199945-200017:- gene-YNCJ0005C_MUCL30387 rna-YNCJ0005C_MUCL30387 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
MUCL30388 GCA_001738495.1 Bread Europe CM005448.1:196023-196095:- gene-YNCJ0005C_MUCL30388 rna-YNCJ0005C_MUCL30388 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
MUCL39482 GCA_001738235.1 Sake Asia CM005288.1:190211-190283:- gene-YNCJ0005C_MUCL39482 rna-YNCJ0005C_MUCL39482 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
MUCL42920 GCA_001738485.1 Bread Europe CM005432.1:196018-196090:- gene-YNCJ0005C_MUCL42920 rna-YNCJ0005C_MUCL42920 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
NCIM3186 GCA_001029075.1 Bioethanol Asia CP011819.1:197292-197364:- gene-YNCJ0005C_NCIM3186 rna-YNCJ0005C_NCIM3186 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
NCYC1407 GCA_001738225.1 Sake Asia CM005272.1:188618-188690:- gene-YNCJ0005C_NCYC1407 rna-YNCJ0005C_NCYC1407 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
PE2H3 GCA_905220325.1 Bioethanol South America HG994149.1:201383-201455:- gene-YNCJ0005C_PE2H3 rna-YNCJ0005C_PE2H3 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
PE2H4 GCA_905220315.1 Bioethanol South America LR999881.1:201027-201099:- gene-YNCJ0005C_PE2H4 rna-YNCJ0005C_PE2H4 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
S288C GCF_000146045.2 Laboratory Not applicable NC_001142.9:197313-197385:- gene-YNCJ0005C_S288C rna-YNCJ0005C_S288C Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
SA1 GCA_004114265.1 Bioethanol South America SDIA01000085.1:1782-1854:+ gene-YNCJ0005C_SA1 rna-YNCJ0005C_SA1 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
ThermosaccDry GCA_001738605.1 Bioethanol Asia CM005496.1:188439-188511:- gene-YNCJ0005C_ThermosaccDry rna-YNCJ0005C_ThermosaccDry Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
VR1 GCA_001738595.1 Bioethanol South America CM005464.1:195499-195571:- gene-YNCJ0005C_VR1 rna-YNCJ0005C_VR1 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
ZTW1 GCA_000308935.1 Bioethanol Asia AMDD01000021.1:175721-175793:- gene-YNCJ0005C_ZTW1 rna-YNCJ0005C_ZTW1 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
Sparadoxus GCF_002079055.1 Not applicable Not applicable NC_047496.1:200937-201009:- gene-YNCJ0005C_Sparadoxus rna-YNCJ0005C_Sparadoxus Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding

Additional files