YNCH0003C (YNCH0003C)

Gene profile

Gene name: YNCH0003C
Reference locus (S288C): YNCH0003C
Gene biotype: tRNA

Description: Unknown

Top 10 interactors (score): Unknown

Homologues (species, bitscore): Unknown

External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser

Comparative analysis of strains

Search table

strain assembly application macro_region gene_coord geneID rnaID protID %id %cov_exon status copyNumber copyID nORFs match_ref_CDS validORF missing_startCodon missing_stopCodon outOfFrame_stopCodon
AKU4011 GCA_001738255.1 Sake Asia CM005302.1:104708-104780:- gene-YNCH0003C_AKU4011 rna-YNCH0003C_AKU4011 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
BG1 GCA_001932575.1 Bioethanol South America MSHP01000053.1:24424-24496:- gene-YNCH0003C_BG1 rna-YNCH0003C_BG1 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
Bruggeman GCA_001738585.1 Bread Not Applicable CM005510.1:111566-111638:- gene-YNCH0003C_Bruggeman rna-YNCH0003C_Bruggeman Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
CAT1 GCA_001738705.1 Bioethanol South America CM005526.1:105550-105622:- gene-YNCH0003C_CAT1 rna-YNCH0003C_CAT1 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
CBS1585 GCA_001738375.1 Sake Asia CM005366.1:105295-105367:- gene-YNCH0003C_CBS1585 rna-YNCH0003C_CBS1585 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
CBS436 GCA_001738355.1 Sake Asia CM005350.1:97798-97870:- gene-YNCH0003C_CBS436 rna-YNCH0003C_CBS436 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
CBS6412 GCA_001738345.1 Sake Asia CM005334.1:104894-104966:- gene-YNCH0003C_CBS6412 rna-YNCH0003C_CBS6412 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
CBS6413 GCA_001738265.1 Sake Asia CM005318.1:104622-104694:- gene-YNCH0003C_CBS6413 rna-YNCH0003C_CBS6413 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
CENPK1137D GCA_000269885.1 Laboratory Not Applicable CM001529.1:109253-109325:- gene-YNCH0003C_CENPK1137D rna-YNCH0003C_CENPK1137D Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
EthanolRed GCA_001738615.1 Bioethanol Asia CM005478.1:104704-104776:- gene-YNCH0003C_EthanolRed rna-YNCH0003C_EthanolRed Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
FaliES1 GCA_001738715.1 Bioethanol Asia CM005542.1:105233-105305:- gene-YNCH0003C_FaliES1 rna-YNCH0003C_FaliES1 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
JAY291 GCA_000182315.2 Bioethanol South America ACFL01000064.1:16655-16727:+ gene-YNCH0003C_JAY291 rna-YNCH0003C_JAY291 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
MUCL30387 GCA_001738515.1 Bread Europe CM005414.1:108307-108379:- gene-YNCH0003C_MUCL30387 rna-YNCH0003C_MUCL30387 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
MUCL30388 GCA_001738495.1 Bread Europe CM005446.1:109517-109589:- gene-YNCH0003C_MUCL30388 rna-YNCH0003C_MUCL30388 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
MUCL39482 GCA_001738235.1 Sake Asia CM005286.1:104321-104393:- gene-YNCH0003C_MUCL39482 rna-YNCH0003C_MUCL39482 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
MUCL42920 GCA_001738485.1 Bread Europe CM005430.1:108226-108298:- gene-YNCH0003C_MUCL42920 rna-YNCH0003C_MUCL42920 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
NCIM3186 GCA_001029075.1 Bioethanol Asia CP011817.1:115989-116061:- gene-YNCH0003C_NCIM3186 rna-YNCH0003C_NCIM3186 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
NCYC1407 GCA_001738225.1 Sake Asia CM005270.1:103739-103811:- gene-YNCH0003C_NCYC1407 rna-YNCH0003C_NCYC1407 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
PE2H3 GCA_905220325.1 Bioethanol South America HG994147.1:105943-106015:- gene-YNCH0003C_PE2H3 rna-YNCH0003C_PE2H3 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
PE2H4 GCA_905220315.1 Bioethanol South America LR999879.1:113384-113456:- gene-YNCH0003C_PE2H4 rna-YNCH0003C_PE2H4 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
S288C GCF_000146045.2 Laboratory Not applicable NC_001140.6:116107-116179:- gene-YNCH0003C_S288C rna-YNCH0003C_S288C Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
SA1 GCA_004114265.1 Bioethanol South America SDIA01000075.1:30375-30447:+ gene-YNCH0003C_SA1 rna-YNCH0003C_SA1 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
ThermosaccDry GCA_001738605.1 Bioethanol Asia CM005494.1:106323-106395:- gene-YNCH0003C_ThermosaccDry rna-YNCH0003C_ThermosaccDry Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
VR1 GCA_001738595.1 Bioethanol South America CM005462.1:111870-111942:- gene-YNCH0003C_VR1 rna-YNCH0003C_VR1 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
ZTW1 GCA_000308935.1 Bioethanol Asia AMDD01000017.1:97488-97560:- gene-YNCH0003C_ZTW1 rna-YNCH0003C_ZTW1 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
Sparadoxus GCF_002079055.1 Not applicable Not applicable NC_047494.1:104072-104144:- gene-YNCH0003C_Sparadoxus rna-YNCH0003C_Sparadoxus Unknown 98.6 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding

Additional files