YNCH0002C (YNCH0002C)

Gene profile

Gene name: YNCH0002C
Reference locus (S288C): YNCH0002C
Gene biotype: tRNA

Description: Unknown

Top 10 interactors (score): Unknown

Homologues (species, bitscore): Unknown

External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser

Comparative analysis of strains

Search table

strain assembly application macro_region gene_coord geneID rnaID protID %id %cov_exon status copyNumber copyID nORFs match_ref_CDS validORF missing_startCodon missing_stopCodon outOfFrame_stopCodon
AKU4011 GCA_001738255.1 Sake Asia CM005302.1:80254-80327:- gene-YNCH0002C_AKU4011 rna-YNCH0002C_AKU4011 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
Bruggeman GCA_001738585.1 Bread Not Applicable CM005510.1:87116-87189:- gene-YNCH0002C_Bruggeman rna-YNCH0002C_Bruggeman Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
CAT1 GCA_001738705.1 Bioethanol South America CM005526.1:81089-81162:- gene-YNCH0002C_CAT1 rna-YNCH0002C_CAT1 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
CBS1585 GCA_001738375.1 Sake Asia CM005366.1:80841-80914:- gene-YNCH0002C_CBS1585 rna-YNCH0002C_CBS1585 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
CBS436 GCA_001738355.1 Sake Asia CM005350.1:73339-73412:- gene-YNCH0002C_CBS436 rna-YNCH0002C_CBS436 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
CBS6412 GCA_001738345.1 Sake Asia CM005334.1:80441-80514:- gene-YNCH0002C_CBS6412 rna-YNCH0002C_CBS6412 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
CBS6413 GCA_001738265.1 Sake Asia CM005318.1:80164-80237:- gene-YNCH0002C_CBS6413 rna-YNCH0002C_CBS6413 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
EthanolRed GCA_001738615.1 Bioethanol Asia CM005478.1:80248-80321:- gene-YNCH0002C_EthanolRed rna-YNCH0002C_EthanolRed Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
FaliES1 GCA_001738715.1 Bioethanol Asia CM005542.1:80777-80850:- gene-YNCH0002C_FaliES1 rna-YNCH0002C_FaliES1 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
MUCL30387 GCA_001738515.1 Bread Europe CM005414.1:83847-83920:- gene-YNCH0002C_MUCL30387 rna-YNCH0002C_MUCL30387 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
MUCL30388 GCA_001738495.1 Bread Europe MBVW01000248.1:252-325:- gene-YNCH0002C_MUCL30388 rna-YNCH0002C_MUCL30388 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
MUCL39482 GCA_001738235.1 Sake Asia CM005286.1:79867-79940:- gene-YNCH0002C_MUCL39482 rna-YNCH0002C_MUCL39482 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
MUCL42920 GCA_001738485.1 Bread Europe CM005430.1:83776-83849:- gene-YNCH0002C_MUCL42920 rna-YNCH0002C_MUCL42920 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
NCIM3186 GCA_001029075.1 Bioethanol Asia CP011817.1:85180-85253:- gene-YNCH0002C_NCIM3186 rna-YNCH0002C_NCIM3186 Unknown 97.2 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
NCYC1407 GCA_001738225.1 Sake Asia CM005270.1:79286-79359:- gene-YNCH0002C_NCYC1407 rna-YNCH0002C_NCYC1407 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
PE2H3 GCA_905220325.1 Bioethanol South America HG994147.1:75551-75624:- gene-YNCH0002C_PE2H3 rna-YNCH0002C_PE2H3 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
PE2H4 GCA_905220315.1 Bioethanol South America LR999879.1:82992-83065:- gene-YNCH0002C_PE2H4 rna-YNCH0002C_PE2H4 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
S288C GCF_000146045.2 Laboratory Not applicable NC_001140.6:85298-85371:- gene-YNCH0002C_S288C rna-YNCH0002C_S288C Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
SA1 GCA_004114265.1 Bioethanol South America SDIA01000075.1:54835-54908:+ gene-YNCH0002C_SA1 rna-YNCH0002C_SA1 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
ThermosaccDry GCA_001738605.1 Bioethanol Asia CM005494.1:81867-81940:- gene-YNCH0002C_ThermosaccDry rna-YNCH0002C_ThermosaccDry Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
VR1 GCA_001738595.1 Bioethanol South America CM005462.1:87409-87482:- gene-YNCH0002C_VR1 rna-YNCH0002C_VR1 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
Sparadoxus GCF_002079055.1 Not applicable Not applicable NC_047494.1:79405-79478:- gene-YNCH0002C_Sparadoxus rna-YNCH0002C_Sparadoxus Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding

Additional files