YNCG0042C (YNCG0042C)

Gene profile

Gene name: YNCG0042C
Reference locus (S288C): YNCG0042C
Gene biotype: tRNA

Description: Unknown

Top 10 interactors (score): Unknown

Homologues (species, bitscore): Unknown

External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser

Comparative analysis of strains

Search table

strain assembly application macro_region gene_coord geneID rnaID protID %id %cov_exon status copyNumber copyID nORFs match_ref_CDS validORF missing_startCodon missing_stopCodon outOfFrame_stopCodon
AKU4011 GCA_001738255.1 Sake Asia MBVO01000066.1:2753-2858:- gene-YNCG0042C_AKU4011 rna-YNCG0042C_AKU4011 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
BG1 GCA_001932575.1 Bioethanol South America MSHP01000021.1:124554-124659:- gene-YNCG0042C_BG1 rna-YNCG0042C_BG1 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
Bruggeman GCA_001738585.1 Bread Not Applicable CM005509.1:852415-852520:- gene-YNCG0042C_Bruggeman rna-YNCG0042C_Bruggeman Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
CAT1 GCA_001738705.1 Bioethanol South America CM005525.1:850184-850289:- gene-YNCG0042C_CAT1 rna-YNCG0042C_CAT1 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
CBS1585 GCA_001738375.1 Sake Asia CM005365.1:847175-847280:- gene-YNCG0042C_CBS1585 rna-YNCG0042C_CBS1585 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
CBS436 GCA_001738355.1 Sake Asia CM005349.1:851020-851125:- gene-YNCG0042C_CBS436 rna-YNCG0042C_CBS436 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
CBS6412 GCA_001738345.1 Sake Asia CM005333.1:838547-838652:- gene-YNCG0042C_CBS6412 rna-YNCG0042C_CBS6412 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
CBS6413 GCA_001738265.1 Sake Asia CM005317.1:844041-844146:- gene-YNCG0042C_CBS6413 rna-YNCG0042C_CBS6413 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
CENPK1137D GCA_000269885.1 Laboratory Not Applicable CM001528.1:878436-878541:- gene-YNCG0042C_CENPK1137D rna-YNCG0042C_CENPK1137D Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
EthanolRed GCA_001738615.1 Bioethanol Asia CM005477.1:833052-833157:- gene-YNCG0042C_EthanolRed rna-YNCG0042C_EthanolRed Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
FaliES1 GCA_001738715.1 Bioethanol Asia CM005541.1:837443-837548:- gene-YNCG0042C_FaliES1 rna-YNCG0042C_FaliES1 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
JAY291 GCA_000182315.2 Bioethanol South America ACFL01000146.1:2491-2596:- gene-YNCG0042C_JAY291 rna-YNCG0042C_JAY291 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
MUCL30387 GCA_001738515.1 Bread Europe CM005413.1:849905-850010:- gene-YNCG0042C_MUCL30387 rna-YNCG0042C_MUCL30387 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
MUCL30388 GCA_001738495.1 Bread Europe CM005445.1:849591-849696:- gene-YNCG0042C_MUCL30388 rna-YNCG0042C_MUCL30388 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
MUCL39482 GCA_001738235.1 Sake Asia CM005285.1:842749-842854:- gene-YNCG0042C_MUCL39482 rna-YNCG0042C_MUCL39482 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
MUCL42920 GCA_001738485.1 Bread Europe CM005429.1:860288-860393:- gene-YNCG0042C_MUCL42920 rna-YNCG0042C_MUCL42920 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
NCIM3186 GCA_001029075.1 Bioethanol Asia CP011816.1:878710-878815:- gene-YNCG0042C_NCIM3186 rna-YNCG0042C_NCIM3186 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
NCYC1407 GCA_001738225.1 Sake Asia CM005269.1:837859-837964:- gene-YNCG0042C_NCYC1407 rna-YNCG0042C_NCYC1407 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
PE2H3 GCA_905220325.1 Bioethanol South America HG994146.1:857038-857143:- gene-YNCG0042C_PE2H3 rna-YNCG0042C_PE2H3 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
PE2H4 GCA_905220315.1 Bioethanol South America LR999878.1:862148-862253:- gene-YNCG0042C_PE2H4 rna-YNCG0042C_PE2H4 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
S288C GCF_000146045.2 Laboratory Not applicable NC_001139.9:878710-878815:- gene-YNCG0042C_S288C rna-YNCG0042C_S288C Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
SA1 GCA_004114265.1 Bioethanol South America SDIA01000035.1:102409-102514:- gene-YNCG0042C_SA1 rna-YNCG0042C_SA1 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
ThermosaccDry GCA_001738605.1 Bioethanol Asia CM005493.1:857954-858059:- gene-YNCG0042C_ThermosaccDry rna-YNCG0042C_ThermosaccDry Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
VR1 GCA_001738595.1 Bioethanol South America CM005461.1:962186-962291:- gene-YNCG0042C_VR1 rna-YNCG0042C_VR1 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
ZTW1 GCA_000308935.1 Bioethanol Asia AMDD01000016.1:159390-159495:- gene-YNCG0042C_ZTW1 rna-YNCG0042C_ZTW1 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
Sparadoxus GCF_002079055.1 Not applicable Not applicable NC_047493.1:848832-848937:- gene-YNCG0042C_Sparadoxus rna-YNCG0042C_Sparadoxus Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding

Additional files