YNCG0009C (YNCG0009C)

Gene profile

Gene name: YNCG0009C
Reference locus (S288C): YNCG0009C
Gene biotype: tRNA

Description: Unknown

Top 10 interactors (score): Unknown

Homologues (species, bitscore): Unknown

External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser

Comparative analysis of strains

Search table

strain assembly application macro_region gene_coord geneID rnaID protID %id %cov_exon status copyNumber copyID nORFs match_ref_CDS validORF missing_startCodon missing_stopCodon outOfFrame_stopCodon
AKU4011 GCA_001738255.1 Sake Asia CM005301.1:290099-290204:- gene-YNCG0009C_AKU4011 rna-YNCG0009C_AKU4011 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
BG1 GCA_001932575.1 Bioethanol South America MSHP01000192.1:1992-2097:- gene-YNCG0009C_1_BG1 Unknown Unknown 100.0 100.0 Unannotated 2 2 0 Unknown Unknown non_coding non_coding non_coding
BG1 GCA_001932575.1 Bioethanol South America MSHP01000132.1:114960-115065:+ gene-YNCG0009C_BG1 rna-YNCG0009C_BG1 Unknown 100.0 100.0 Unannotated 2 1 0 Unknown False non_coding non_coding non_coding
Bruggeman GCA_001738585.1 Bread Not Applicable CM005518.1:58316-58421:- gene-YNCG0009C_1_Bruggeman Unknown Unknown 100.0 100.0 Unannotated 2 2 0 Unknown Unknown non_coding non_coding non_coding
Bruggeman GCA_001738585.1 Bread Not Applicable CM005509.1:292842-292947:- gene-YNCG0009C_Bruggeman rna-YNCG0009C_Bruggeman Unknown 100.0 100.0 Unannotated 2 1 0 Unknown False non_coding non_coding non_coding
CAT1 GCA_001738705.1 Bioethanol South America CM005531.1:359528-359633:- gene-YNCG0009C_1_CAT1 Unknown Unknown 100.0 100.0 Unannotated 2 2 0 Unknown Unknown non_coding non_coding non_coding
CAT1 GCA_001738705.1 Bioethanol South America CM005525.1:288361-288466:- gene-YNCG0009C_CAT1 rna-YNCG0009C_CAT1 Unknown 100.0 100.0 Unannotated 2 1 0 Unknown False non_coding non_coding non_coding
CBS1585 GCA_001738375.1 Sake Asia CM005365.1:293425-293530:- gene-YNCG0009C_CBS1585 rna-YNCG0009C_CBS1585 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
CBS436 GCA_001738355.1 Sake Asia CM005349.1:288313-288418:- gene-YNCG0009C_CBS436 rna-YNCG0009C_CBS436 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
CBS6412 GCA_001738345.1 Sake Asia CM005333.1:278702-278807:- gene-YNCG0009C_CBS6412 rna-YNCG0009C_CBS6412 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
CBS6413 GCA_001738265.1 Sake Asia CM005317.1:288301-288406:- gene-YNCG0009C_CBS6413 rna-YNCG0009C_CBS6413 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
CENPK1137D GCA_000269885.1 Laboratory Not Applicable CM001528.1:287537-287642:- gene-YNCG0009C_CENPK1137D rna-YNCG0009C_CENPK1137D Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
EthanolRed GCA_001738615.1 Bioethanol Asia CM005477.1:279621-279726:- gene-YNCG0009C_EthanolRed rna-YNCG0009C_EthanolRed Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
FaliES1 GCA_001738715.1 Bioethanol Asia CM005541.1:281802-281907:- gene-YNCG0009C_FaliES1 rna-YNCG0009C_FaliES1 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
JAY291 GCA_000182315.2 Bioethanol South America ACFL01000046.1:19732-19837:+ gene-YNCG0009C_JAY291 rna-YNCG0009C_JAY291 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
MUCL30387 GCA_001738515.1 Bread Europe CM005413.1:289812-289917:- gene-YNCG0009C_MUCL30387 rna-YNCG0009C_MUCL30387 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
MUCL30388 GCA_001738495.1 Bread Europe CM005449.1:304247-304352:+ gene-YNCG0009C_2_MUCL30388 Unknown Unknown 100.0 100.0 Unannotated 4 3 0 Unknown Unknown non_coding non_coding non_coding
MUCL30388 GCA_001738495.1 Bread Europe CM005451.1:359610-359715:- gene-YNCG0009C_1_MUCL30388 Unknown Unknown 100.0 100.0 Unannotated 4 2 0 Unknown Unknown non_coding non_coding non_coding
MUCL30388 GCA_001738495.1 Bread Europe MBVW01000357.1:33-138:- gene-YNCG0009C_3_MUCL30388 Unknown Unknown 100.0 100.0 Unannotated 4 4 0 Unknown Unknown non_coding non_coding non_coding
MUCL30388 GCA_001738495.1 Bread Europe CM005445.1:292904-293009:- gene-YNCG0009C_MUCL30388 rna-YNCG0009C_MUCL30388 Unknown 100.0 100.0 Unannotated 4 1 0 Unknown False non_coding non_coding non_coding
MUCL39482 GCA_001738235.1 Sake Asia CM005285.1:290522-290627:- gene-YNCG0009C_MUCL39482 rna-YNCG0009C_MUCL39482 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
MUCL42920 GCA_001738485.1 Bread Europe CM005435.1:356923-357028:- gene-YNCG0009C_1_MUCL42920 Unknown Unknown 100.0 100.0 Unannotated 2 2 0 Unknown Unknown non_coding non_coding non_coding
MUCL42920 GCA_001738485.1 Bread Europe CM005429.1:293802-293907:- gene-YNCG0009C_MUCL42920 rna-YNCG0009C_MUCL42920 Unknown 100.0 100.0 Unannotated 2 1 0 Unknown False non_coding non_coding non_coding
NCIM3186 GCA_001029075.1 Bioethanol Asia CP011816.1:287350-287455:- gene-YNCG0009C_NCIM3186 rna-YNCG0009C_NCIM3186 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
NCYC1407 GCA_001738225.1 Sake Asia CM005269.1:282012-282117:- gene-YNCG0009C_NCYC1407 rna-YNCG0009C_NCYC1407 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
PE2H3 GCA_905220325.1 Bioethanol South America HG994146.1:283394-283499:- gene-YNCG0009C_PE2H3 rna-YNCG0009C_PE2H3 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
PE2H4 GCA_905220315.1 Bioethanol South America LR999878.1:288392-288497:- gene-YNCG0009C_PE2H4 rna-YNCG0009C_PE2H4 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
S288C GCF_000146045.2 Laboratory Not applicable NC_001139.9:287350-287455:- gene-YNCG0009C_S288C rna-YNCG0009C_S288C Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
SA1 GCA_004114265.1 Bioethanol South America SDIA01000064.1:32145-32250:- gene-YNCG0009C_SA1 rna-YNCG0009C_SA1 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
ThermosaccDry GCA_001738605.1 Bioethanol Asia CM005493.1:282014-282119:- gene-YNCG0009C_ThermosaccDry rna-YNCG0009C_ThermosaccDry Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
VR1 GCA_001738595.1 Bioethanol South America CM005461.1:392119-392224:- gene-YNCG0009C_VR1 rna-YNCG0009C_VR1 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
ZTW1 GCA_000308935.1 Bioethanol Asia AMDD01000014.1:279582-279687:- gene-YNCG0009C_ZTW1 rna-YNCG0009C_ZTW1 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
Sparadoxus GCF_002079055.1 Not applicable Not applicable NC_047493.1:285777-285882:- gene-YNCG0009C_Sparadoxus rna-YNCG0009C_Sparadoxus Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding

Additional files