YNCF0009C (YNCF0009C)

Gene profile

Gene name: YNCF0009C
Reference locus (S288C): YNCF0009C
Gene biotype: tRNA

Description: Unknown

Top 10 interactors (score): Unknown

Homologues (species, bitscore): Unknown

External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser

Comparative analysis of strains

Search table

strain assembly application macro_region gene_coord geneID rnaID protID %id %cov_exon status copyNumber copyID nORFs match_ref_CDS validORF missing_startCodon missing_stopCodon outOfFrame_stopCodon
AKU4011 GCA_001738255.1 Sake Asia CM005300.1:181751-181851:- gene-YNCF0009C_AKU4011 rna-YNCF0009C_AKU4011 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
BG1 GCA_001932575.1 Bioethanol South America MSHP01000071.1:78832-78932:+ gene-YNCF0009C_BG1 rna-YNCF0009C_BG1 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
Bruggeman GCA_001738585.1 Bread Not Applicable CM005514.1:768891-768991:+ gene-YNCF0009C_3_Bruggeman Unknown Unknown 100.0 100.0 Unannotated 4 4 0 Unknown Unknown non_coding non_coding non_coding
Bruggeman GCA_001738585.1 Bread Not Applicable MBVY01000360.1:799-899:+ gene-YNCF0009C_1_Bruggeman Unknown Unknown 100.0 100.0 Unannotated 4 2 0 Unknown Unknown non_coding non_coding non_coding
Bruggeman GCA_001738585.1 Bread Not Applicable MBVY01000385.1:57-157:- gene-YNCF0009C_2_Bruggeman Unknown Unknown 100.0 100.0 Unannotated 4 3 0 Unknown Unknown non_coding non_coding non_coding
Bruggeman GCA_001738585.1 Bread Not Applicable CM005508.1:183607-183707:- gene-YNCF0009C_Bruggeman rna-YNCF0009C_Bruggeman Unknown 100.0 100.0 Unannotated 4 1 0 Unknown False non_coding non_coding non_coding
CAT1 GCA_001738705.1 Bioethanol South America CM005524.1:187129-187229:- gene-YNCF0009C_CAT1 rna-YNCF0009C_CAT1 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
CBS1585 GCA_001738375.1 Sake Asia CM005364.1:183242-183342:- gene-YNCF0009C_CBS1585 rna-YNCF0009C_CBS1585 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
CBS436 GCA_001738355.1 Sake Asia CM005348.1:156453-156553:- gene-YNCF0009C_CBS436 rna-YNCF0009C_CBS436 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
CBS6412 GCA_001738345.1 Sake Asia CM005332.1:182323-182423:- gene-YNCF0009C_CBS6412 rna-YNCF0009C_CBS6412 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
CBS6413 GCA_001738265.1 Sake Asia CM005316.1:184977-185077:- gene-YNCF0009C_CBS6413 rna-YNCF0009C_CBS6413 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
CENPK1137D GCA_000269885.1 Laboratory Not Applicable CM001527.1:187585-187685:- gene-YNCF0009C_CENPK1137D rna-YNCF0009C_CENPK1137D Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
EthanolRed GCA_001738615.1 Bioethanol Asia CM005476.1:180859-180959:- gene-YNCF0009C_EthanolRed rna-YNCF0009C_EthanolRed Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
FaliES1 GCA_001738715.1 Bioethanol Asia CM005549.1:259223-259323:+ gene-YNCF0009C_1_FaliES1 Unknown Unknown 100.0 100.0 Unannotated 3 2 0 Unknown Unknown non_coding non_coding non_coding
FaliES1 GCA_001738715.1 Bioethanol Asia MBWD01000054.1:124-224:- gene-YNCF0009C_2_FaliES1 Unknown Unknown 100.0 100.0 Unannotated 3 3 0 Unknown Unknown non_coding non_coding non_coding
FaliES1 GCA_001738715.1 Bioethanol Asia CM005540.1:182508-182608:- gene-YNCF0009C_FaliES1 rna-YNCF0009C_FaliES1 Unknown 100.0 100.0 Unannotated 3 1 0 Unknown False non_coding non_coding non_coding
JAY291 GCA_000182315.2 Bioethanol South America ACFL01000452.1:29247-29347:- gene-YNCF0009C_JAY291 rna-YNCF0009C_JAY291 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
MUCL30387 GCA_001738515.1 Bread Europe CM005421.1:265821-265921:+ gene-YNCF0009C_2_MUCL30387 Unknown Unknown 100.0 100.0 Unannotated 3 3 0 Unknown Unknown non_coding non_coding non_coding
MUCL30387 GCA_001738515.1 Bread Europe MBVX01000047.1:799-899:+ gene-YNCF0009C_1_MUCL30387 Unknown Unknown 100.0 100.0 Unannotated 3 2 0 Unknown Unknown non_coding non_coding non_coding
MUCL30387 GCA_001738515.1 Bread Europe CM005412.1:184833-184933:- gene-YNCF0009C_MUCL30387 rna-YNCF0009C_MUCL30387 Unknown 100.0 100.0 Unannotated 3 1 0 Unknown False non_coding non_coding non_coding
MUCL30388 GCA_001738495.1 Bread Europe MBVW01000168.1:799-899:+ gene-YNCF0009C_1_MUCL30388 Unknown Unknown 100.0 100.0 Unannotated 2 2 0 Unknown Unknown non_coding non_coding non_coding
MUCL30388 GCA_001738495.1 Bread Europe CM005444.1:181078-181178:- gene-YNCF0009C_MUCL30388 rna-YNCF0009C_MUCL30388 Unknown 100.0 100.0 Unannotated 2 1 0 Unknown False non_coding non_coding non_coding
MUCL39482 GCA_001738235.1 Sake Asia CM005284.1:181161-181261:- gene-YNCF0009C_MUCL39482 rna-YNCF0009C_MUCL39482 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
MUCL42920 GCA_001738485.1 Bread Europe MBVV01000357.1:460-560:- gene-YNCF0009C_1_MUCL42920 Unknown Unknown 100.0 100.0 Unannotated 2 2 0 Unknown Unknown non_coding non_coding non_coding
MUCL42920 GCA_001738485.1 Bread Europe CM005428.1:180484-180584:- gene-YNCF0009C_MUCL42920 rna-YNCF0009C_MUCL42920 Unknown 100.0 100.0 Unannotated 2 1 0 Unknown False non_coding non_coding non_coding
NCIM3186 GCA_001029075.1 Bioethanol Asia CP011815.1:191512-191612:- gene-YNCF0009C_NCIM3186 rna-YNCF0009C_NCIM3186 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
NCYC1407 GCA_001738225.1 Sake Asia CM005268.1:182042-182142:- gene-YNCF0009C_NCYC1407 rna-YNCF0009C_NCYC1407 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
PE2H3 GCA_905220325.1 Bioethanol South America HG994145.1:201276-201376:- gene-YNCF0009C_PE2H3 rna-YNCF0009C_PE2H3 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
PE2H4 GCA_905220315.1 Bioethanol South America LR999877.1:200824-200924:- gene-YNCF0009C_PE2H4 rna-YNCF0009C_PE2H4 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
S288C GCF_000146045.2 Laboratory Not applicable NC_001138.5:191513-191613:- gene-YNCF0009C_S288C rna-YNCF0009C_S288C Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
SA1 GCA_004114265.1 Bioethanol South America SDIA01000011.1:132782-132882:+ gene-YNCF0009C_SA1 rna-YNCF0009C_SA1 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
ThermosaccDry GCA_001738605.1 Bioethanol Asia CM005492.1:181666-181766:- gene-YNCF0009C_ThermosaccDry rna-YNCF0009C_ThermosaccDry Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
VR1 GCA_001738595.1 Bioethanol South America CM005460.1:197442-197542:- gene-YNCF0009C_2_VR1 Unknown Unknown 100.0 100.0 Unannotated 3 3 0 Unknown Unknown non_coding non_coding non_coding
VR1 GCA_001738595.1 Bioethanol South America MBVZ01000260.1:21-121:- gene-YNCF0009C_1_VR1 Unknown Unknown 100.0 100.0 Unannotated 3 2 0 Unknown Unknown non_coding non_coding non_coding
VR1 GCA_001738595.1 Bioethanol South America CM005460.1:197193-197293:- gene-YNCF0009C_VR1 rna-YNCF0009C_VR1 Unknown 100.0 100.0 Unannotated 3 1 0 Unknown False non_coding non_coding non_coding
ZTW1 GCA_000308935.1 Bioethanol Asia AMDD01000013.1:112139-112239:- gene-YNCF0009C_ZTW1 rna-YNCF0009C_ZTW1 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
Sparadoxus GCF_002079055.1 Not applicable Not applicable NC_047492.1:205591-205691:- gene-YNCF0009C_Sparadoxus rna-YNCF0009C_Sparadoxus Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding

Additional files