YNCF0005C (YNCF0005C)

Gene profile

Gene name: YNCF0005C
Reference locus (S288C): YNCF0005C
Gene biotype: tRNA

Description: Unknown

Top 10 interactors (score): Unknown

Homologues (species, bitscore): Unknown

External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser

Comparative analysis of strains

Search table

strain assembly application macro_region gene_coord geneID rnaID protID %id %cov_exon status copyNumber copyID nORFs match_ref_CDS validORF missing_startCodon missing_stopCodon outOfFrame_stopCodon
AKU4011 GCA_001738255.1 Sake Asia CM005300.1:148362-148453:- gene-YNCF0005C_AKU4011 rna-YNCF0005C_AKU4011 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
BG1 GCA_001932575.1 Bioethanol South America MSHP01000079.1:33256-33347:- gene-YNCF0005C_BG1 rna-YNCF0005C_BG1 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
Bruggeman GCA_001738585.1 Bread Not Applicable CM005508.1:147929-148020:- gene-YNCF0005C_Bruggeman rna-YNCF0005C_Bruggeman Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
CAT1 GCA_001738705.1 Bioethanol South America CM005524.1:153092-153183:- gene-YNCF0005C_CAT1 rna-YNCF0005C_CAT1 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
CBS1585 GCA_001738375.1 Sake Asia CM005364.1:149186-149277:- gene-YNCF0005C_CBS1585 rna-YNCF0005C_CBS1585 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
CBS436 GCA_001738355.1 Sake Asia CM005348.1:123033-123124:- gene-YNCF0005C_CBS436 rna-YNCF0005C_CBS436 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
CBS6412 GCA_001738345.1 Sake Asia CM005332.1:148927-149018:- gene-YNCF0005C_CBS6412 rna-YNCF0005C_CBS6412 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
CBS6413 GCA_001738265.1 Sake Asia CM005316.1:151437-151528:- gene-YNCF0005C_CBS6413 rna-YNCF0005C_CBS6413 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
CENPK1137D GCA_000269885.1 Laboratory Not Applicable CM001527.1:154048-154139:- gene-YNCF0005C_CENPK1137D rna-YNCF0005C_CENPK1137D Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
EthanolRed GCA_001738615.1 Bioethanol Asia CM005476.1:147349-147440:- gene-YNCF0005C_EthanolRed rna-YNCF0005C_EthanolRed Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
FaliES1 GCA_001738715.1 Bioethanol Asia CM005540.1:148996-149087:- gene-YNCF0005C_FaliES1 rna-YNCF0005C_FaliES1 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
JAY291 GCA_000182315.2 Bioethanol South America ACFL01000451.1:13102-13193:- gene-YNCF0005C_JAY291 rna-YNCF0005C_JAY291 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
MUCL30387 GCA_001738515.1 Bread Europe CM005412.1:150276-150367:- gene-YNCF0005C_MUCL30387 rna-YNCF0005C_MUCL30387 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
MUCL30388 GCA_001738495.1 Bread Europe CM005444.1:147534-147625:- gene-YNCF0005C_MUCL30388 rna-YNCF0005C_MUCL30388 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
MUCL39482 GCA_001738235.1 Sake Asia CM005284.1:147629-147720:- gene-YNCF0005C_MUCL39482 rna-YNCF0005C_MUCL39482 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
MUCL42920 GCA_001738485.1 Bread Europe CM005428.1:146894-146985:- gene-YNCF0005C_MUCL42920 rna-YNCF0005C_MUCL42920 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
NCIM3186 GCA_001029075.1 Bioethanol Asia CP011815.1:157915-158006:- gene-YNCF0005C_NCIM3186 rna-YNCF0005C_NCIM3186 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
NCYC1407 GCA_001738225.1 Sake Asia CM005268.1:148645-148736:- gene-YNCF0005C_NCYC1407 rna-YNCF0005C_NCYC1407 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
PE2H3 GCA_905220325.1 Bioethanol South America HG994145.1:167711-167802:- gene-YNCF0005C_PE2H3 rna-YNCF0005C_PE2H3 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
PE2H4 GCA_905220315.1 Bioethanol South America LR999877.1:167259-167350:- gene-YNCF0005C_PE2H4 rna-YNCF0005C_PE2H4 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
S288C GCF_000146045.2 Laboratory Not applicable NC_001138.5:157916-158007:- gene-YNCF0005C_S288C rna-YNCF0005C_S288C Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
SA1 GCA_004114265.1 Bioethanol South America SDIA01000011.1:166220-166311:+ gene-YNCF0005C_SA1 rna-YNCF0005C_SA1 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
ThermosaccDry GCA_001738605.1 Bioethanol Asia CM005492.1:148155-148246:- gene-YNCF0005C_ThermosaccDry rna-YNCF0005C_ThermosaccDry Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
VR1 GCA_001738595.1 Bioethanol South America CM005460.1:163358-163449:- gene-YNCF0005C_VR1 rna-YNCF0005C_VR1 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
ZTW1 GCA_000308935.1 Bioethanol Asia AMDD01000013.1:78605-78696:- gene-YNCF0005C_ZTW1 rna-YNCF0005C_ZTW1 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
Sparadoxus GCF_002079055.1 Not applicable Not applicable NC_047492.1:171812-171903:- gene-YNCF0005C_Sparadoxus rna-YNCF0005C_Sparadoxus Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding

Additional files