YNCE0008C (YNCE0008C)

Gene profile

Gene name: YNCE0008C
Reference locus (S288C): YNCE0008C
Gene biotype: tRNA

Description: Unknown

Top 10 interactors (score): Unknown

Homologues (species, bitscore): Unknown

External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser

Comparative analysis of strains

Search table

strain assembly application macro_region gene_coord geneID rnaID protID %id %cov_exon status copyNumber copyID nORFs match_ref_CDS validORF missing_startCodon missing_stopCodon outOfFrame_stopCodon
AKU4011 GCA_001738255.1 Sake Asia CM005299.1:125109-125180:- gene-YNCE0008C_AKU4011 rna-YNCE0008C_AKU4011 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
BG1 GCA_001932575.1 Bioethanol South America MSHP01000011.1:300785-300856:+ gene-YNCE0008C_BG1 rna-YNCE0008C_BG1 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
Bruggeman GCA_001738585.1 Bread Not Applicable CM005507.1:131636-131707:- gene-YNCE0008C_Bruggeman rna-YNCE0008C_Bruggeman Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
CAT1 GCA_001738705.1 Bioethanol South America CM005523.1:127287-127358:- gene-YNCE0008C_CAT1 rna-YNCE0008C_CAT1 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
CBS1585 GCA_001738375.1 Sake Asia CM005363.1:125050-125121:- gene-YNCE0008C_CBS1585 rna-YNCE0008C_CBS1585 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
CBS436 GCA_001738355.1 Sake Asia CM005347.1:126687-126758:- gene-YNCE0008C_CBS436 rna-YNCE0008C_CBS436 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
CBS6412 GCA_001738345.1 Sake Asia CM005331.1:125328-125399:- gene-YNCE0008C_CBS6412 rna-YNCE0008C_CBS6412 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
CBS6413 GCA_001738265.1 Sake Asia CM005315.1:129936-130007:- gene-YNCE0008C_CBS6413 rna-YNCE0008C_CBS6413 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
CENPK1137D GCA_000269885.1 Laboratory Not Applicable CM001526.1:128938-129009:- gene-YNCE0008C_CENPK1137D rna-YNCE0008C_CENPK1137D Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
EthanolRed GCA_001738615.1 Bioethanol Asia CM005475.1:125429-125500:- gene-YNCE0008C_EthanolRed rna-YNCE0008C_EthanolRed Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
FaliES1 GCA_001738715.1 Bioethanol Asia CM005539.1:125688-125759:- gene-YNCE0008C_FaliES1 rna-YNCE0008C_FaliES1 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
JAY291 GCA_000182315.2 Bioethanol South America ACFL01000398.1:44578-44649:- gene-YNCE0008C_JAY291 rna-YNCE0008C_JAY291 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
MUCL30387 GCA_001738515.1 Bread Europe CM005411.1:129356-129427:- gene-YNCE0008C_MUCL30387 rna-YNCE0008C_MUCL30387 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
MUCL30388 GCA_001738495.1 Bread Europe CM005443.1:125325-125396:- gene-YNCE0008C_MUCL30388 rna-YNCE0008C_MUCL30388 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
MUCL39482 GCA_001738235.1 Sake Asia CM005283.1:124413-124484:- gene-YNCE0008C_MUCL39482 rna-YNCE0008C_MUCL39482 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
MUCL42920 GCA_001738485.1 Bread Europe CM005427.1:129043-129114:- gene-YNCE0008C_MUCL42920 rna-YNCE0008C_MUCL42920 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
NCIM3186 GCA_001029075.1 Bioethanol Asia CP011814.1:131081-131152:- gene-YNCE0008C_NCIM3186 rna-YNCE0008C_NCIM3186 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
NCYC1407 GCA_001738225.1 Sake Asia CM005267.1:129519-129590:- gene-YNCE0008C_NCYC1407 rna-YNCE0008C_NCYC1407 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
PE2H3 GCA_905220325.1 Bioethanol South America HG994144.1:133545-133616:- gene-YNCE0008C_PE2H3 rna-YNCE0008C_PE2H3 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
PE2H4 GCA_905220315.1 Bioethanol South America LR999876.1:129460-129531:- gene-YNCE0008C_PE2H4 rna-YNCE0008C_PE2H4 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
S288C GCF_000146045.2 Laboratory Not applicable NC_001137.3:131082-131153:- gene-YNCE0008C_S288C rna-YNCE0008C_S288C Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
SA1 GCA_004114265.1 Bioethanol South America SDIA01000020.1:112073-112144:+ gene-YNCE0008C_SA1 rna-YNCE0008C_SA1 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
ThermosaccDry GCA_001738605.1 Bioethanol Asia CM005491.1:126093-126164:- gene-YNCE0008C_ThermosaccDry rna-YNCE0008C_ThermosaccDry Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
VR1 GCA_001738595.1 Bioethanol South America CM005459.1:125636-125707:- gene-YNCE0008C_VR1 rna-YNCE0008C_VR1 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
ZTW1 GCA_000308935.1 Bioethanol Asia AMDD01000009.1:124453-124524:- gene-YNCE0008C_ZTW1 rna-YNCE0008C_ZTW1 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
Sparadoxus GCF_002079055.1 Not applicable Not applicable NC_047488.1:361005-361076:+ gene-YNCE0008C_Sparadoxus rna-YNCE0008C_Sparadoxus Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding

Additional files