YNCD0028W (YNCD0028W)

Gene profile

Gene name: YNCD0028W
Reference locus (S288C): YNCD0028W
Gene biotype: tRNA

Description: Unknown

Top 10 interactors (score): Unknown

Homologues (species, bitscore): Unknown

External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser

Comparative analysis of strains

Search table

strain assembly application macro_region gene_coord geneID rnaID protID %id %cov_exon status copyNumber copyID nORFs match_ref_CDS validORF missing_startCodon missing_stopCodon outOfFrame_stopCodon
AKU4011 GCA_001738255.1 Sake Asia CM005298.1:1245763-1245844:+ gene-YNCD0028W_AKU4011 rna-YNCD0028W_AKU4011 Unknown 98.7 98.7 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
BG1 GCA_001932575.1 Bioethanol South America MSHP01000039.1:124269-124350:+ gene-YNCD0028W_BG1 rna-YNCD0028W_BG1 Unknown 98.7 98.7 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
Bruggeman GCA_001738585.1 Bread Not Applicable CM005506.1:1276665-1276746:+ gene-YNCD0028W_Bruggeman rna-YNCD0028W_Bruggeman Unknown 98.7 98.7 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
CAT1 GCA_001738705.1 Bioethanol South America CM005522.1:1255224-1255305:+ gene-YNCD0028W_CAT1 rna-YNCD0028W_CAT1 Unknown 98.7 98.7 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
CBS1585 GCA_001738375.1 Sake Asia CM005362.1:1240683-1240764:+ gene-YNCD0028W_CBS1585 rna-YNCD0028W_CBS1585 Unknown 98.7 98.7 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
CBS436 GCA_001738355.1 Sake Asia CM005346.1:1259562-1259643:+ gene-YNCD0028W_CBS436 rna-YNCD0028W_CBS436 Unknown 98.7 98.7 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
CBS6412 GCA_001738345.1 Sake Asia CM005330.1:1236737-1236818:+ gene-YNCD0028W_CBS6412 rna-YNCD0028W_CBS6412 Unknown 98.7 98.7 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
CBS6413 GCA_001738265.1 Sake Asia CM005314.1:1258592-1258673:+ gene-YNCD0028W_CBS6413 rna-YNCD0028W_CBS6413 Unknown 98.7 98.7 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
CENPK1137D GCA_000269885.1 Laboratory Not Applicable CM001525.1:1304289-1304370:+ gene-YNCD0028W_CENPK1137D rna-YNCD0028W_CENPK1137D Unknown 98.7 98.7 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
EthanolRed GCA_001738615.1 Bioethanol Asia CM005474.1:937995-938076:- gene-YNCD0028W_EthanolRed rna-YNCD0028W_EthanolRed Unknown 97.5 98.7 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
FaliES1 GCA_001738715.1 Bioethanol Asia CM005536.1:230060-230141:+ gene-YNCD0028W_FaliES1 rna-YNCD0028W_FaliES1 Unknown 98.7 98.7 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
MUCL30387 GCA_001738515.1 Bread Europe CM005410.1:1260226-1260307:+ gene-YNCD0028W_MUCL30387 rna-YNCD0028W_MUCL30387 Unknown 98.7 98.7 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
MUCL30388 GCA_001738495.1 Bread Europe CM005442.1:1242333-1242414:+ gene-YNCD0028W_MUCL30388 rna-YNCD0028W_MUCL30388 Unknown 98.7 98.7 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
MUCL39482 GCA_001738235.1 Sake Asia CM005282.1:1232011-1232092:+ gene-YNCD0028W_MUCL39482 rna-YNCD0028W_MUCL39482 Unknown 98.7 98.7 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
MUCL42920 GCA_001738485.1 Bread Europe CM005426.1:868841-868922:- gene-YNCD0028W_MUCL42920 rna-YNCD0028W_MUCL42920 Unknown 96.3 98.7 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
NCIM3186 GCA_001029075.1 Bioethanol Asia CP011813.1:1305553-1305635:+ gene-YNCD0028W_NCIM3186 rna-YNCD0028W_NCIM3186 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
NCYC1407 GCA_001738225.1 Sake Asia CM005266.1:1245983-1246064:+ gene-YNCD0028W_NCYC1407 rna-YNCD0028W_NCYC1407 Unknown 98.7 98.7 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
PE2H3 GCA_905220325.1 Bioethanol South America HG994143.1:1256138-1256219:+ gene-YNCD0028W_PE2H3 rna-YNCD0028W_PE2H3 Unknown 98.7 98.7 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
PE2H4 GCA_905220315.1 Bioethanol South America LR999875.1:1261706-1261787:+ gene-YNCD0028W_PE2H4 rna-YNCD0028W_PE2H4 Unknown 98.7 98.7 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
S288C GCF_000146045.2 Laboratory Not applicable NC_001136.10:1305630-1305712:+ gene-YNCD0028W_S288C rna-YNCD0028W_S288C Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
SA1 GCA_004114265.1 Bioethanol South America SDIA01000037.1:75627-75708:- gene-YNCD0028W_SA1 rna-YNCD0028W_SA1 Unknown 98.7 98.7 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
ThermosaccDry GCA_001738605.1 Bioethanol Asia CM005490.1:944351-944432:- gene-YNCD0028W_ThermosaccDry rna-YNCD0028W_ThermosaccDry Unknown 97.5 98.7 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
VR1 GCA_001738595.1 Bioethanol South America CM005458.1:1272942-1273023:+ gene-YNCD0028W_VR1 rna-YNCD0028W_VR1 Unknown 98.7 98.7 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
ZTW1 GCA_000308935.1 Bioethanol Asia AMDD01000008.1:300532-300613:+ gene-YNCD0028W_ZTW1 rna-YNCD0028W_ZTW1 Unknown 98.7 98.7 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
Sparadoxus GCF_002079055.1 Not applicable Not applicable NC_047493.1:557833-557914:- gene-YNCD0028W_Sparadoxus rna-YNCD0028W_Sparadoxus Unknown 97.5 98.7 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding

Additional files