YNCD0013C (YNCD0013C)

Gene profile

Gene name: YNCD0013C
Reference locus (S288C): YNCD0013C
Gene biotype: tRNA

Description: Unknown

Top 10 interactors (score): Unknown

Homologues (species, bitscore): Unknown

External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser

Comparative analysis of strains

Search table

strain assembly application macro_region gene_coord geneID rnaID protID %id %cov_exon status copyNumber copyID nORFs match_ref_CDS validORF missing_startCodon missing_stopCodon outOfFrame_stopCodon
AKU4011 GCA_001738255.1 Sake Asia CM005298.1:597525-597597:- gene-YNCD0013C_AKU4011 rna-YNCD0013C_AKU4011 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
BG1 GCA_001932575.1 Bioethanol South America MSHP01000080.1:527720-527792:+ gene-YNCD0013C_BG1 rna-YNCD0013C_BG1 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
Bruggeman GCA_001738585.1 Bread Not Applicable MBVY01000170.1:258-330:- gene-YNCD0013C_2_Bruggeman Unknown Unknown 100.0 100.0 Unannotated 3 3 0 Unknown Unknown non_coding non_coding non_coding
Bruggeman GCA_001738585.1 Bread Not Applicable MBVY01000202.1:334-406:+ gene-YNCD0013C_1_Bruggeman Unknown Unknown 100.0 100.0 Unannotated 3 2 0 Unknown Unknown non_coding non_coding non_coding
Bruggeman GCA_001738585.1 Bread Not Applicable CM005506.1:629756-629828:- gene-YNCD0013C_Bruggeman rna-YNCD0013C_Bruggeman Unknown 100.0 100.0 Unannotated 3 1 0 Unknown False non_coding non_coding non_coding
CAT1 GCA_001738705.1 Bioethanol South America CM005522.1:614440-614512:- gene-YNCD0013C_CAT1 rna-YNCD0013C_CAT1 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
CBS1585 GCA_001738375.1 Sake Asia CM005362.1:588546-588618:- gene-YNCD0013C_CBS1585 rna-YNCD0013C_CBS1585 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
CBS436 GCA_001738355.1 Sake Asia MBVR01000075.1:1230-1302:+ gene-YNCD0013C_1_CBS436 Unknown Unknown 100.0 100.0 Unannotated 2 2 0 Unknown Unknown non_coding non_coding non_coding
CBS436 GCA_001738355.1 Sake Asia CM005346.1:613559-613631:- gene-YNCD0013C_CBS436 rna-YNCD0013C_CBS436 Unknown 100.0 100.0 Unannotated 2 1 0 Unknown False non_coding non_coding non_coding
CBS6412 GCA_001738345.1 Sake Asia CM005330.1:584959-585031:- gene-YNCD0013C_CBS6412 rna-YNCD0013C_CBS6412 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
CBS6413 GCA_001738265.1 Sake Asia CM005314.1:613491-613563:- gene-YNCD0013C_CBS6413 rna-YNCD0013C_CBS6413 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
CENPK1137D GCA_000269885.1 Laboratory Not Applicable CM001525.1:619011-619083:- gene-YNCD0013C_CENPK1137D rna-YNCD0013C_CENPK1137D Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
EthanolRed GCA_001738615.1 Bioethanol Asia CM005474.1:599316-599388:- gene-YNCD0013C_EthanolRed rna-YNCD0013C_EthanolRed Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
FaliES1 GCA_001738715.1 Bioethanol Asia CM005538.1:606110-606182:- gene-YNCD0013C_FaliES1 rna-YNCD0013C_FaliES1 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
JAY291 GCA_000182315.2 Bioethanol South America ACFL01000358.1:25087-25159:+ gene-YNCD0013C_JAY291 rna-YNCD0013C_JAY291 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
MUCL30387 GCA_001738515.1 Bread Europe CM005418.1:364247-364319:+ gene-YNCD0013C_2_MUCL30387 Unknown Unknown 100.0 100.0 Unannotated 4 3 0 Unknown Unknown non_coding non_coding non_coding
MUCL30387 GCA_001738515.1 Bread Europe MBVX01000210.1:1180-1252:+ gene-YNCD0013C_1_MUCL30387 Unknown Unknown 100.0 100.0 Unannotated 4 2 0 Unknown Unknown non_coding non_coding non_coding
MUCL30387 GCA_001738515.1 Bread Europe MBVX01000223.1:151-223:- gene-YNCD0013C_3_MUCL30387 Unknown Unknown 100.0 100.0 Unannotated 4 4 0 Unknown Unknown non_coding non_coding non_coding
MUCL30387 GCA_001738515.1 Bread Europe CM005410.1:614373-614445:- gene-YNCD0013C_MUCL30387 rna-YNCD0013C_MUCL30387 Unknown 100.0 100.0 Unannotated 4 1 0 Unknown False non_coding non_coding non_coding
MUCL30388 GCA_001738495.1 Bread Europe MBVW01000189.1:607-679:+ gene-YNCD0013C_1_MUCL30388 Unknown Unknown 100.0 100.0 Unannotated 2 2 0 Unknown Unknown non_coding non_coding non_coding
MUCL30388 GCA_001738495.1 Bread Europe CM005442.1:604684-604756:- gene-YNCD0013C_MUCL30388 rna-YNCD0013C_MUCL30388 Unknown 100.0 100.0 Unannotated 2 1 0 Unknown False non_coding non_coding non_coding
MUCL39482 GCA_001738235.1 Sake Asia CM005282.1:589916-589988:- gene-YNCD0013C_MUCL39482 rna-YNCD0013C_MUCL39482 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
MUCL42920 GCA_001738485.1 Bread Europe CM005426.1:521368-521440:- gene-YNCD0013C_MUCL42920 rna-YNCD0013C_MUCL42920 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
NCIM3186 GCA_001029075.1 Bioethanol Asia CP011813.1:619892-619964:- gene-YNCD0013C_NCIM3186 rna-YNCD0013C_NCIM3186 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
NCYC1407 GCA_001738225.1 Sake Asia CM005266.1:588823-588895:- gene-YNCD0013C_NCYC1407 rna-YNCD0013C_NCYC1407 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
PE2H3 GCA_905220325.1 Bioethanol South America HG994143.1:608291-608363:- gene-YNCD0013C_PE2H3 rna-YNCD0013C_PE2H3 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
PE2H4 GCA_905220315.1 Bioethanol South America LR999875.1:607596-607668:- gene-YNCD0013C_PE2H4 rna-YNCD0013C_PE2H4 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
S288C GCF_000146045.2 Laboratory Not applicable NC_001136.10:619969-620041:- gene-YNCD0013C_S288C rna-YNCD0013C_S288C Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
SA1 GCA_004114265.1 Bioethanol South America SDIA01000011.1:25296-25368:+ gene-YNCD0013C_SA1 rna-YNCD0013C_SA1 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
ThermosaccDry GCA_001738605.1 Bioethanol Asia CM005498.1:357752-357824:+ gene-YNCD0013C_1_ThermosaccDry Unknown Unknown 100.0 100.0 Unannotated 3 2 0 Unknown Unknown non_coding non_coding non_coding
ThermosaccDry GCA_001738605.1 Bioethanol Asia MBWA01000111.1:149-221:- gene-YNCD0013C_2_ThermosaccDry Unknown Unknown 100.0 100.0 Unannotated 3 3 0 Unknown Unknown non_coding non_coding non_coding
ThermosaccDry GCA_001738605.1 Bioethanol Asia CM005490.1:605640-605712:- gene-YNCD0013C_ThermosaccDry rna-YNCD0013C_ThermosaccDry Unknown 100.0 100.0 Unannotated 3 1 0 Unknown False non_coding non_coding non_coding
VR1 GCA_001738595.1 Bioethanol South America CM005458.1:618190-618262:- gene-YNCD0013C_VR1 rna-YNCD0013C_VR1 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
ZTW1 GCA_000308935.1 Bioethanol Asia AMDD01000006.1:603223-603295:- gene-YNCD0013C_ZTW1 rna-YNCD0013C_ZTW1 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
Sparadoxus GCF_002079055.1 Not applicable Not applicable NC_047490.1:607917-607989:- gene-YNCD0013C_Sparadoxus rna-YNCD0013C_Sparadoxus Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding

Additional files