YNCD0008W (YNCD0008W)

Gene profile

Gene name: YNCD0008W
Reference locus (S288C): YNCD0008W
Gene biotype: tRNA

Description: Unknown

Top 10 interactors (score): Unknown

Homologues (species, bitscore): Unknown

External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser

Comparative analysis of strains

Search table

strain assembly application macro_region gene_coord geneID rnaID protID %id %cov_exon status copyNumber copyID nORFs match_ref_CDS validORF missing_startCodon missing_stopCodon outOfFrame_stopCodon
AKU4011 GCA_001738255.1 Sake Asia CM005298.1:505459-505542:+ gene-YNCD0008W_AKU4011 rna-YNCD0008W_AKU4011 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
BG1 GCA_001932575.1 Bioethanol South America MSHP01000030.1:47586-47669:+ gene-YNCD0008W_BG1 rna-YNCD0008W_BG1 Unknown 98.8 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
Bruggeman GCA_001738585.1 Bread Not Applicable MBVY01000300.1:258-341:- gene-YNCD0008W_Bruggeman rna-YNCD0008W_Bruggeman Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
CAT1 GCA_001738705.1 Bioethanol South America MBWC01000065.1:654-737:+ gene-YNCD0008W_CAT1 rna-YNCD0008W_CAT1 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
CBS1585 GCA_001738375.1 Sake Asia CM005362.1:495917-496000:+ gene-YNCD0008W_CBS1585 rna-YNCD0008W_CBS1585 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
CBS436 GCA_001738355.1 Sake Asia CM005344.1:4503-4586:+ gene-YNCD0008W_CBS436 rna-YNCD0008W_CBS436 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
CBS6412 GCA_001738345.1 Sake Asia CM005328.1:1343-1426:+ gene-YNCD0008W_CBS6412 rna-YNCD0008W_CBS6412 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
CBS6413 GCA_001738265.1 Sake Asia CM005314.1:521497-521580:+ gene-YNCD0008W_CBS6413 rna-YNCD0008W_CBS6413 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
CENPK1137D GCA_000269885.1 Laboratory Not Applicable CM001525.1:518709-518792:+ gene-YNCD0008W_CENPK1137D rna-YNCD0008W_CENPK1137D Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
EthanolRed GCA_001738615.1 Bioethanol Asia CM005472.1:23723-23806:+ gene-YNCD0008W_EthanolRed rna-YNCD0008W_EthanolRed Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
FaliES1 GCA_001738715.1 Bioethanol Asia CM005538.1:513706-513789:+ gene-YNCD0008W_FaliES1 rna-YNCD0008W_FaliES1 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
JAY291 GCA_000182315.2 Bioethanol South America ACFL01000184.1:897-980:+ gene-YNCD0008W_JAY291 rna-YNCD0008W_JAY291 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
MUCL30387 GCA_001738515.1 Bread Europe MBVX01000126.1:240-323:- gene-YNCD0008W_MUCL30387 rna-YNCD0008W_MUCL30387 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
MUCL30388 GCA_001738495.1 Bread Europe MBVW01000338.1:632-715:- gene-YNCD0008W_MUCL30388 rna-YNCD0008W_MUCL30388 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
MUCL39482 GCA_001738235.1 Sake Asia CM005290.1:943339-943422:- gene-YNCD0008W_MUCL39482 rna-YNCD0008W_MUCL39482 Unknown 98.8 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
MUCL42920 GCA_001738485.1 Bread Europe MBVV01000350.1:425-508:+ gene-YNCD0008W_MUCL42920 rna-YNCD0008W_MUCL42920 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
NCIM3186 GCA_001029075.1 Bioethanol Asia CP011813.1:519666-519749:+ gene-YNCD0008W_NCIM3186 rna-YNCD0008W_NCIM3186 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
NCYC1407 GCA_001738225.1 Sake Asia CM005266.1:496720-496803:+ gene-YNCD0008W_NCYC1407 rna-YNCD0008W_NCYC1407 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
PE2H3 GCA_905220325.1 Bioethanol South America HG994143.1:512183-512266:+ gene-YNCD0008W_PE2H3 rna-YNCD0008W_PE2H3 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
PE2H4 GCA_905220315.1 Bioethanol South America LR999875.1:511488-511571:+ gene-YNCD0008W_PE2H4 rna-YNCD0008W_PE2H4 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
S288C GCF_000146045.2 Laboratory Not applicable NC_001136.10:519743-519826:+ gene-YNCD0008W_S288C rna-YNCD0008W_S288C Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
SA1 GCA_004114265.1 Bioethanol South America SDIA01000065.1:40951-41034:+ gene-YNCD0008W_SA1 rna-YNCD0008W_SA1 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
ThermosaccDry GCA_001738605.1 Bioethanol Asia CM005490.1:513184-513267:+ gene-YNCD0008W_ThermosaccDry rna-YNCD0008W_ThermosaccDry Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
VR1 GCA_001738595.1 Bioethanol South America MBVZ01000096.1:102-185:- gene-YNCD0008W_VR1 rna-YNCD0008W_VR1 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
ZTW1 GCA_000308935.1 Bioethanol Asia AMDD01000022.1:81750-81833:+ gene-YNCD0008W_ZTW1 rna-YNCD0008W_ZTW1 Unknown 98.8 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
Sparadoxus GCF_002079055.1 Not applicable Not applicable NC_047490.1:515212-515295:+ gene-YNCD0008W_Sparadoxus rna-YNCD0008W_Sparadoxus Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding

Additional files