YNCD0003W (YNCD0003W)

Gene profile

Gene name: YNCD0003W
Reference locus (S288C): YNCD0003W
Gene biotype: tRNA

Description: Unknown

Top 10 interactors (score): Unknown

Homologues (species, bitscore): Unknown

External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser

Comparative analysis of strains

Search table

strain assembly application macro_region gene_coord geneID rnaID protID %id %cov_exon status copyNumber copyID nORFs match_ref_CDS validORF missing_startCodon missing_stopCodon outOfFrame_stopCodon
AKU4011 GCA_001738255.1 Sake Asia CM005298.1:344142-344237:+ gene-YNCD0003W_AKU4011 rna-YNCD0003W_AKU4011 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
BG1 GCA_001932575.1 Bioethanol South America MSHP01000102.1:205432-205527:- gene-YNCD0003W_BG1 rna-YNCD0003W_BG1 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
Bruggeman GCA_001738585.1 Bread Not Applicable CM005506.1:361965-362060:+ gene-YNCD0003W_Bruggeman rna-YNCD0003W_Bruggeman Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
CAT1 GCA_001738705.1 Bioethanol South America MBWC01000101.1:249-344:- gene-YNCD0003W_1_CAT1 Unknown Unknown 100.0 100.0 Unannotated 2 2 0 Unknown Unknown non_coding non_coding non_coding
CAT1 GCA_001738705.1 Bioethanol South America MBWC01000152.1:408-503:- gene-YNCD0003W_CAT1 rna-YNCD0003W_CAT1 Unknown 100.0 100.0 Unannotated 2 1 0 Unknown False non_coding non_coding non_coding
CBS1585 GCA_001738375.1 Sake Asia CM005362.1:342421-342516:+ gene-YNCD0003W_CBS1585 rna-YNCD0003W_CBS1585 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
CBS436 GCA_001738355.1 Sake Asia CM005346.1:359129-359224:+ gene-YNCD0003W_CBS436 rna-YNCD0003W_CBS436 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
CBS6412 GCA_001738345.1 Sake Asia CM005330.1:340490-340585:+ gene-YNCD0003W_CBS6412 rna-YNCD0003W_CBS6412 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
CBS6413 GCA_001738265.1 Sake Asia CM005314.1:360516-360611:+ gene-YNCD0003W_CBS6413 rna-YNCD0003W_CBS6413 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
CENPK1137D GCA_000269885.1 Laboratory Not Applicable CM001525.1:358394-358489:+ gene-YNCD0003W_CENPK1137D rna-YNCD0003W_CENPK1137D Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
EthanolRed GCA_001738615.1 Bioethanol Asia CM005474.1:354976-355071:+ gene-YNCD0003W_EthanolRed rna-YNCD0003W_EthanolRed Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
FaliES1 GCA_001738715.1 Bioethanol Asia MBWD01000039.1:180-275:- gene-YNCD0003W_1_FaliES1 Unknown Unknown 100.0 100.0 Unannotated 2 2 0 Unknown Unknown non_coding non_coding non_coding
FaliES1 GCA_001738715.1 Bioethanol Asia CM005538.1:361223-361318:+ gene-YNCD0003W_FaliES1 rna-YNCD0003W_FaliES1 Unknown 100.0 100.0 Unannotated 2 1 0 Unknown False non_coding non_coding non_coding
MUCL30387 GCA_001738515.1 Bread Europe CM005418.1:861507-861602:+ gene-YNCD0003W_1_MUCL30387 Unknown Unknown 100.0 100.0 Unannotated 2 2 0 Unknown Unknown non_coding non_coding non_coding
MUCL30387 GCA_001738515.1 Bread Europe CM005410.1:359354-359449:+ gene-YNCD0003W_MUCL30387 rna-YNCD0003W_MUCL30387 Unknown 100.0 100.0 Unannotated 2 1 0 Unknown False non_coding non_coding non_coding
MUCL30388 GCA_001738495.1 Bread Europe CM005450.1:868199-868294:+ gene-YNCD0003W_1_MUCL30388 Unknown Unknown 100.0 100.0 Unannotated 3 2 0 Unknown Unknown non_coding non_coding non_coding
MUCL30388 GCA_001738495.1 Bread Europe CM005454.1:760362-760457:- gene-YNCD0003W_2_MUCL30388 Unknown Unknown 100.0 100.0 Unannotated 3 3 0 Unknown Unknown non_coding non_coding non_coding
MUCL30388 GCA_001738495.1 Bread Europe CM005442.1:350482-350577:+ gene-YNCD0003W_MUCL30388 rna-YNCD0003W_MUCL30388 Unknown 100.0 100.0 Unannotated 3 1 0 Unknown False non_coding non_coding non_coding
MUCL39482 GCA_001738235.1 Sake Asia CM005282.1:343540-343635:+ gene-YNCD0003W_MUCL39482 rna-YNCD0003W_MUCL39482 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
MUCL42920 GCA_001738485.1 Bread Europe CM005426.1:265548-265643:+ gene-YNCD0003W_MUCL42920 rna-YNCD0003W_MUCL42920 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
NCIM3186 GCA_001029075.1 Bioethanol Asia CP011813.1:359500-359595:+ gene-YNCD0003W_NCIM3186 rna-YNCD0003W_NCIM3186 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
NCYC1407 GCA_001738225.1 Sake Asia CM005277.1:432069-432164:+ gene-YNCD0003W_2_NCYC1407 Unknown Unknown 100.0 100.0 Unannotated 3 3 0 Unknown Unknown non_coding non_coding non_coding
NCYC1407 GCA_001738225.1 Sake Asia MBVM01000096.1:351-446:+ gene-YNCD0003W_1_NCYC1407 Unknown Unknown 100.0 100.0 Unannotated 3 2 0 Unknown Unknown non_coding non_coding non_coding
NCYC1407 GCA_001738225.1 Sake Asia CM005266.1:343528-343623:+ gene-YNCD0003W_NCYC1407 rna-YNCD0003W_NCYC1407 Unknown 100.0 100.0 Unannotated 3 1 0 Unknown False non_coding non_coding non_coding
PE2H3 GCA_905220325.1 Bioethanol South America HG994143.1:350704-350799:+ gene-YNCD0003W_PE2H3 rna-YNCD0003W_PE2H3 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
PE2H4 GCA_905220315.1 Bioethanol South America LR999875.1:350704-350799:+ gene-YNCD0003W_PE2H4 rna-YNCD0003W_PE2H4 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
S288C GCF_000146045.2 Laboratory Not applicable NC_001136.10:359577-359672:+ gene-YNCD0003W_S288C rna-YNCD0003W_S288C Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
SA1 GCA_004114265.1 Bioethanol South America SDIA01000010.1:75263-75358:- gene-YNCD0003W_SA1 rna-YNCD0003W_SA1 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
ThermosaccDry GCA_001738605.1 Bioethanol Asia CM005501.1:422179-422274:+ gene-YNCD0003W_1_ThermosaccDry Unknown Unknown 100.0 100.0 Unannotated 2 2 0 Unknown Unknown non_coding non_coding non_coding
ThermosaccDry GCA_001738605.1 Bioethanol Asia CM005490.1:360675-360770:+ gene-YNCD0003W_ThermosaccDry rna-YNCD0003W_ThermosaccDry Unknown 100.0 100.0 Unannotated 2 1 0 Unknown False non_coding non_coding non_coding
VR1 GCA_001738595.1 Bioethanol South America CM005469.1:423443-423538:+ gene-YNCD0003W_1_VR1 Unknown Unknown 100.0 100.0 Unannotated 2 2 0 Unknown Unknown non_coding non_coding non_coding
VR1 GCA_001738595.1 Bioethanol South America CM005458.1:363593-363688:+ gene-YNCD0003W_VR1 rna-YNCD0003W_VR1 Unknown 100.0 100.0 Unannotated 2 1 0 Unknown False non_coding non_coding non_coding
ZTW1 GCA_000308935.1 Bioethanol Asia AMDD01000006.1:358606-358701:+ gene-YNCD0003W_ZTW1 rna-YNCD0003W_ZTW1 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
Sparadoxus GCF_002079055.1 Not applicable Not applicable NC_047490.1:361062-361157:+ gene-YNCD0003W_Sparadoxus rna-YNCD0003W_Sparadoxus Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding

Additional files