YNCC0010C (YNCC0010C)

Gene profile

Gene name: YNCC0010C
Reference locus (S288C): YNCC0010C
Gene biotype: tRNA

Description: Unknown

Top 10 interactors (score): Unknown

Homologues (species, bitscore): Unknown

External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser

Comparative analysis of strains

Search table

strain assembly application macro_region gene_coord geneID rnaID protID %id %cov_exon status copyNumber copyID nORFs match_ref_CDS validORF missing_startCodon missing_stopCodon outOfFrame_stopCodon
AKU4011 GCA_001738255.1 Sake Asia CM005297.1:162789-162860:- gene-YNCC0010C_AKU4011 rna-YNCC0010C_AKU4011 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
BG1 GCA_001932575.1 Bioethanol South America MSHP01000067.1:16942-17013:- gene-YNCC0010C_BG1 rna-YNCC0010C_BG1 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
Bruggeman GCA_001738585.1 Bread Not Applicable MBVY01000267.1:248-319:- gene-YNCC0010C_1_Bruggeman Unknown Unknown 100.0 100.0 Unannotated 2 2 0 Unknown Unknown non_coding non_coding non_coding
Bruggeman GCA_001738585.1 Bread Not Applicable CM005505.1:158108-158179:- gene-YNCC0010C_Bruggeman rna-YNCC0010C_Bruggeman Unknown 100.0 100.0 Unannotated 2 1 0 Unknown False non_coding non_coding non_coding
CAT1 GCA_001738705.1 Bioethanol South America CM005522.1:513552-513623:+ gene-YNCC0010C_1_CAT1 Unknown Unknown 100.0 100.0 Unannotated 2 2 0 Unknown Unknown non_coding non_coding non_coding
CAT1 GCA_001738705.1 Bioethanol South America CM005521.1:169678-169749:- gene-YNCC0010C_CAT1 rna-YNCC0010C_CAT1 Unknown 100.0 100.0 Unannotated 2 1 0 Unknown False non_coding non_coding non_coding
CBS1585 GCA_001738375.1 Sake Asia CM005361.1:157550-157621:- gene-YNCC0010C_CBS1585 rna-YNCC0010C_CBS1585 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
CBS436 GCA_001738355.1 Sake Asia CM005345.1:168686-168757:- gene-YNCC0010C_CBS436 rna-YNCC0010C_CBS436 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
CBS6412 GCA_001738345.1 Sake Asia CM005329.1:151403-151474:- gene-YNCC0010C_CBS6412 rna-YNCC0010C_CBS6412 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
CBS6413 GCA_001738265.1 Sake Asia CM005313.1:163727-163798:- gene-YNCC0010C_CBS6413 rna-YNCC0010C_CBS6413 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
CENPK1137D GCA_000269885.1 Laboratory Not Applicable CM001524.1:167783-167854:- gene-YNCC0010C_CENPK1137D rna-YNCC0010C_CENPK1137D Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
EthanolRed GCA_001738615.1 Bioethanol Asia CM005473.1:160805-160876:- gene-YNCC0010C_EthanolRed rna-YNCC0010C_EthanolRed Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
FaliES1 GCA_001738715.1 Bioethanol Asia CM005537.1:163666-163737:- gene-YNCC0010C_FaliES1 rna-YNCC0010C_FaliES1 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
JAY291 GCA_000182315.2 Bioethanol South America ACFL01000371.1:47-118:+ gene-YNCC0010C_JAY291 rna-YNCC0010C_JAY291 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
MUCL30387 GCA_001738515.1 Bread Europe CM005410.1:791156-791227:- gene-YNCC0010C_1_MUCL30387 Unknown Unknown 100.0 100.0 Unannotated 4 2 0 Unknown Unknown non_coding non_coding non_coding
MUCL30387 GCA_001738515.1 Bread Europe MBVX01000171.1:325-396:+ gene-YNCC0010C_2_MUCL30387 Unknown Unknown 100.0 100.0 Unannotated 4 3 0 Unknown Unknown non_coding non_coding non_coding
MUCL30387 GCA_001738515.1 Bread Europe MBVX01000218.1:153-224:- gene-YNCC0010C_3_MUCL30387 Unknown Unknown 100.0 100.0 Unannotated 4 4 0 Unknown Unknown non_coding non_coding non_coding
MUCL30387 GCA_001738515.1 Bread Europe CM005409.1:155286-155357:- gene-YNCC0010C_MUCL30387 rna-YNCC0010C_MUCL30387 Unknown 100.0 100.0 Unannotated 4 1 0 Unknown False non_coding non_coding non_coding
MUCL30388 GCA_001738495.1 Bread Europe MBVW01000198.1:66-137:- gene-YNCC0010C_1_MUCL30388 Unknown Unknown 100.0 100.0 Unannotated 2 2 0 Unknown Unknown non_coding non_coding non_coding
MUCL30388 GCA_001738495.1 Bread Europe CM005441.1:155553-155624:- gene-YNCC0010C_MUCL30388 rna-YNCC0010C_MUCL30388 Unknown 100.0 100.0 Unannotated 2 1 0 Unknown False non_coding non_coding non_coding
MUCL39482 GCA_001738235.1 Sake Asia CM005281.1:163874-163945:- gene-YNCC0010C_MUCL39482 rna-YNCC0010C_MUCL39482 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
MUCL42920 GCA_001738485.1 Bread Europe CM005425.1:160264-160335:- gene-YNCC0010C_MUCL42920 rna-YNCC0010C_MUCL42920 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
NCIM3186 GCA_001029075.1 Bioethanol Asia CP011812.1:167933-168004:- gene-YNCC0010C_NCIM3186 rna-YNCC0010C_NCIM3186 Unknown 98.6 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
NCYC1407 GCA_001738225.1 Sake Asia CM005265.1:165638-165709:- gene-YNCC0010C_NCYC1407 rna-YNCC0010C_NCYC1407 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
PE2H3 GCA_905220325.1 Bioethanol South America HG994142.1:174341-174412:- gene-YNCC0010C_PE2H3 rna-YNCC0010C_PE2H3 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
PE2H4 GCA_905220315.1 Bioethanol South America LR999874.1:168962-169033:- gene-YNCC0010C_PE2H4 rna-YNCC0010C_PE2H4 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
S288C GCF_000146045.2 Laboratory Not applicable NC_001135.5:168301-168372:- gene-YNCC0010C_S288C rna-YNCC0010C_S288C Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
SA1 GCA_004114265.1 Bioethanol South America SDIA01000083.1:16832-16903:- gene-YNCC0010C_SA1 rna-YNCC0010C_SA1 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
ThermosaccDry GCA_001738605.1 Bioethanol Asia CM005489.1:164197-164268:- gene-YNCC0010C_4_ThermosaccDry Unknown Unknown 100.0 100.0 Unannotated 5 5 0 Unknown Unknown non_coding non_coding non_coding
ThermosaccDry GCA_001738605.1 Bioethanol Asia MBWA01000025.1:168-239:+ gene-YNCC0010C_2_ThermosaccDry Unknown Unknown 100.0 100.0 Unannotated 5 3 0 Unknown Unknown non_coding non_coding non_coding
ThermosaccDry GCA_001738605.1 Bioethanol Asia MBWA01000026.1:219-290:- gene-YNCC0010C_1_ThermosaccDry Unknown Unknown 100.0 100.0 Unannotated 5 2 0 Unknown Unknown non_coding non_coding non_coding
ThermosaccDry GCA_001738605.1 Bioethanol Asia MBWA01000053.1:546-617:+ gene-YNCC0010C_3_ThermosaccDry Unknown Unknown 100.0 100.0 Unannotated 5 4 0 Unknown Unknown non_coding non_coding non_coding
ThermosaccDry GCA_001738605.1 Bioethanol Asia CM005489.1:163737-163808:- gene-YNCC0010C_ThermosaccDry rna-YNCC0010C_ThermosaccDry Unknown 100.0 100.0 Unannotated 5 1 0 Unknown False non_coding non_coding non_coding
VR1 GCA_001738595.1 Bioethanol South America MBVZ01000220.1:371-442:- gene-YNCC0010C_1_VR1 Unknown Unknown 100.0 100.0 Unannotated 2 2 0 Unknown Unknown non_coding non_coding non_coding
VR1 GCA_001738595.1 Bioethanol South America CM005457.1:174491-174562:- gene-YNCC0010C_VR1 rna-YNCC0010C_VR1 Unknown 100.0 100.0 Unannotated 2 1 0 Unknown False non_coding non_coding non_coding
ZTW1 GCA_000308935.1 Bioethanol Asia AMDD01000004.1:162665-162736:- gene-YNCC0010C_ZTW1 rna-YNCC0010C_ZTW1 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
Sparadoxus GCF_002079055.1 Not applicable Not applicable NC_047489.1:195894-195965:- gene-YNCC0010C_Sparadoxus rna-YNCC0010C_Sparadoxus Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding

Additional files