YNCC0009C (YNCC0009C)

Gene profile

Gene name: YNCC0009C
Reference locus (S288C): YNCC0009C
Gene biotype: tRNA

Description: Unknown

Top 10 interactors (score): Unknown

Homologues (species, bitscore): Unknown

External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser

Comparative analysis of strains

Search table

strain assembly application macro_region gene_coord geneID rnaID protID %id %cov_exon status copyNumber copyID nORFs match_ref_CDS validORF missing_startCodon missing_stopCodon outOfFrame_stopCodon
AKU4011 GCA_001738255.1 Sake Asia CM005297.1:145757-145829:- gene-YNCC0009C_AKU4011 rna-YNCC0009C_AKU4011 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
Bruggeman GCA_001738585.1 Bread Not Applicable CM005505.1:141049-141121:- gene-YNCC0009C_4_Bruggeman Unknown Unknown 100.0 100.0 Unannotated 6 5 0 Unknown Unknown non_coding non_coding non_coding
Bruggeman GCA_001738585.1 Bread Not Applicable MBVY01000056.1:462-534:+ gene-YNCC0009C_5_Bruggeman Unknown Unknown 100.0 100.0 Unannotated 6 6 0 Unknown Unknown non_coding non_coding non_coding
Bruggeman GCA_001738585.1 Bread Not Applicable MBVY01000061.1:448-520:+ gene-YNCC0009C_3_Bruggeman Unknown Unknown 100.0 100.0 Unannotated 6 4 0 Unknown Unknown non_coding non_coding non_coding
Bruggeman GCA_001738585.1 Bread Not Applicable MBVY01000153.1:278-350:- gene-YNCC0009C_2_Bruggeman Unknown Unknown 100.0 100.0 Unannotated 6 3 0 Unknown Unknown non_coding non_coding non_coding
Bruggeman GCA_001738585.1 Bread Not Applicable MBVY01000332.1:268-340:+ gene-YNCC0009C_1_Bruggeman Unknown Unknown 100.0 100.0 Unannotated 6 2 0 Unknown Unknown non_coding non_coding non_coding
Bruggeman GCA_001738585.1 Bread Not Applicable CM005507.1:440318-440390:- gene-YNCC0009C_Bruggeman rna-YNCC0009C_Bruggeman Unknown 100.0 100.0 Unannotated 6 1 0 Unknown False non_coding non_coding non_coding
CAT1 GCA_001738705.1 Bioethanol South America CM005525.1:846426-846498:+ gene-YNCC0009C_4_CAT1 Unknown Unknown 100.0 100.0 Unannotated 5 5 0 Unknown Unknown non_coding non_coding non_coding
CAT1 GCA_001738705.1 Bioethanol South America MBWC01000059.1:517-589:- gene-YNCC0009C_3_CAT1 Unknown Unknown 100.0 100.0 Unannotated 5 4 0 Unknown Unknown non_coding non_coding non_coding
CAT1 GCA_001738705.1 Bioethanol South America MBWC01000121.1:482-554:+ gene-YNCC0009C_2_CAT1 Unknown Unknown 100.0 100.0 Unannotated 5 3 0 Unknown Unknown non_coding non_coding non_coding
CAT1 GCA_001738705.1 Bioethanol South America MBWC01000165.1:610-682:- gene-YNCC0009C_1_CAT1 Unknown Unknown 100.0 100.0 Unannotated 5 2 0 Unknown Unknown non_coding non_coding non_coding
CAT1 GCA_001738705.1 Bioethanol South America CM005521.1:152370-152442:- gene-YNCC0009C_CAT1 rna-YNCC0009C_CAT1 Unknown 100.0 100.0 Unannotated 5 1 0 Unknown False non_coding non_coding non_coding
CBS1585 GCA_001738375.1 Sake Asia CM005361.1:140518-140590:- gene-YNCC0009C_CBS1585 rna-YNCC0009C_CBS1585 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
CBS436 GCA_001738355.1 Sake Asia CM005345.1:151670-151742:- gene-YNCC0009C_CBS436 rna-YNCC0009C_CBS436 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
CBS6412 GCA_001738345.1 Sake Asia CM005329.1:133873-133945:- gene-YNCC0009C_CBS6412 rna-YNCC0009C_CBS6412 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
CBS6413 GCA_001738265.1 Sake Asia CM005313.1:146203-146275:- gene-YNCC0009C_CBS6413 rna-YNCC0009C_CBS6413 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
EthanolRed GCA_001738615.1 Bioethanol Asia CM005473.1:143778-143850:- gene-YNCC0009C_EthanolRed rna-YNCC0009C_EthanolRed Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
FaliES1 GCA_001738715.1 Bioethanol Asia CM005537.1:146639-146711:- gene-YNCC0009C_FaliES1 rna-YNCC0009C_FaliES1 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
MUCL30387 GCA_001738515.1 Bread Europe MBVX01000037.1:443-515:+ gene-YNCC0009C_1_MUCL30387 Unknown Unknown 100.0 100.0 Unannotated 5 2 0 Unknown Unknown non_coding non_coding non_coding
MUCL30387 GCA_001738515.1 Bread Europe MBVX01000160.1:266-338:+ gene-YNCC0009C_2_MUCL30387 Unknown Unknown 100.0 100.0 Unannotated 5 3 0 Unknown Unknown non_coding non_coding non_coding
MUCL30387 GCA_001738515.1 Bread Europe MBVX01000183.1:144-216:- gene-YNCC0009C_4_MUCL30387 Unknown Unknown 100.0 100.0 Unannotated 5 5 0 Unknown Unknown non_coding non_coding non_coding
MUCL30387 GCA_001738515.1 Bread Europe MBVX01000376.1:72-144:- gene-YNCC0009C_3_MUCL30387 Unknown Unknown 100.0 100.0 Unannotated 5 4 0 Unknown Unknown non_coding non_coding non_coding
MUCL30387 GCA_001738515.1 Bread Europe MBVX01000226.1:456-528:+ gene-YNCC0009C_MUCL30387 rna-YNCC0009C_MUCL30387 Unknown 100.0 100.0 Unannotated 5 1 0 Unknown False non_coding non_coding non_coding
MUCL30388 GCA_001738495.1 Bread Europe MBVW01000148.1:520-592:- gene-YNCC0009C_1_MUCL30388 Unknown Unknown 100.0 100.0 Unannotated 4 2 0 Unknown Unknown non_coding non_coding non_coding
MUCL30388 GCA_001738495.1 Bread Europe MBVW01000209.1:398-470:+ gene-YNCC0009C_2_MUCL30388 Unknown Unknown 100.0 100.0 Unannotated 4 3 0 Unknown Unknown non_coding non_coding non_coding
MUCL30388 GCA_001738495.1 Bread Europe MBVW01000285.1:1011-1083:- gene-YNCC0009C_3_MUCL30388 Unknown Unknown 100.0 100.0 Unannotated 4 4 0 Unknown Unknown non_coding non_coding non_coding
MUCL30388 GCA_001738495.1 Bread Europe CM005441.1:138247-138319:- gene-YNCC0009C_MUCL30388 rna-YNCC0009C_MUCL30388 Unknown 100.0 100.0 Unannotated 4 1 0 Unknown False non_coding non_coding non_coding
MUCL39482 GCA_001738235.1 Sake Asia CM005281.1:146842-146914:- gene-YNCC0009C_MUCL39482 rna-YNCC0009C_MUCL39482 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
MUCL42920 GCA_001738485.1 Bread Europe CM005429.1:857977-858049:+ gene-YNCC0009C_1_MUCL42920 Unknown Unknown 100.0 100.0 Unannotated 3 2 0 Unknown Unknown non_coding non_coding non_coding
MUCL42920 GCA_001738485.1 Bread Europe MBVV01000313.1:676-748:+ gene-YNCC0009C_2_MUCL42920 Unknown Unknown 100.0 100.0 Unannotated 3 3 0 Unknown Unknown non_coding non_coding non_coding
MUCL42920 GCA_001738485.1 Bread Europe CM005425.1:142959-143031:- gene-YNCC0009C_MUCL42920 rna-YNCC0009C_MUCL42920 Unknown 100.0 100.0 Unannotated 3 1 0 Unknown False non_coding non_coding non_coding
NCIM3186 GCA_001029075.1 Bioethanol Asia CP011812.1:150916-150988:- gene-YNCC0009C_NCIM3186 rna-YNCC0009C_NCIM3186 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
PE2H3 GCA_905220325.1 Bioethanol South America HG994142.1:151404-151476:- gene-YNCC0009C_PE2H3 rna-YNCC0009C_PE2H3 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
PE2H4 GCA_905220315.1 Bioethanol South America LR999874.1:151942-152014:- gene-YNCC0009C_PE2H4 rna-YNCC0009C_PE2H4 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
S288C GCF_000146045.2 Laboratory Not applicable NC_001135.5:151284-151356:- gene-YNCC0009C_S288C rna-YNCC0009C_S288C Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
SA1 GCA_004114265.1 Bioethanol South America SDIA01000073.1:312-384:+ gene-YNCC0009C_SA1 rna-YNCC0009C_SA1 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
ThermosaccDry GCA_001738605.1 Bioethanol Asia CM005489.1:146642-146714:- gene-YNCC0009C_ThermosaccDry rna-YNCC0009C_ThermosaccDry Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
VR1 GCA_001738595.1 Bioethanol South America CM005458.1:1319340-1319412:- gene-YNCC0009C_1_VR1 Unknown Unknown 100.0 100.0 Unannotated 3 2 0 Unknown Unknown non_coding non_coding non_coding
VR1 GCA_001738595.1 Bioethanol South America MBVZ01000169.1:583-655:+ gene-YNCC0009C_2_VR1 Unknown Unknown 100.0 100.0 Unannotated 3 3 0 Unknown Unknown non_coding non_coding non_coding
VR1 GCA_001738595.1 Bioethanol South America CM005457.1:157473-157545:- gene-YNCC0009C_VR1 rna-YNCC0009C_VR1 Unknown 100.0 100.0 Unannotated 3 1 0 Unknown False non_coding non_coding non_coding
Sparadoxus GCF_002079055.1 Not applicable Not applicable NC_047489.1:178205-178277:+ gene-YNCC0009C_Sparadoxus rna-YNCC0009C_Sparadoxus Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding

Additional files