YNCC0008W (YNCC0008W)

Gene profile

Gene name: YNCC0008W
Reference locus (S288C): YNCC0008W
Gene biotype: tRNA

Description: Unknown

Top 10 interactors (score): Unknown

Homologues (species, bitscore): Unknown

External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser

Comparative analysis of strains

Search table

strain assembly application macro_region gene_coord geneID rnaID protID %id %cov_exon status copyNumber copyID nORFs match_ref_CDS validORF missing_startCodon missing_stopCodon outOfFrame_stopCodon
AKU4011 GCA_001738255.1 Sake Asia CM005297.1:144392-144463:+ gene-YNCC0008W_AKU4011 rna-YNCC0008W_AKU4011 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
BG1 GCA_001932575.1 Bioethanol South America MSHP01000178.1:1641-1712:- gene-YNCC0008W_BG1 rna-YNCC0008W_BG1 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
Bruggeman GCA_001738585.1 Bread Not Applicable CM005517.1:685818-685889:+ gene-YNCC0008W_1_Bruggeman Unknown Unknown 100.0 100.0 Unannotated 2 2 0 Unknown Unknown non_coding non_coding non_coding
Bruggeman GCA_001738585.1 Bread Not Applicable CM005507.1:99571-99642:+ gene-YNCC0008W_Bruggeman rna-YNCC0008W_Bruggeman Unknown 100.0 100.0 Unannotated 2 1 0 Unknown False non_coding non_coding non_coding
CAT1 GCA_001738705.1 Bioethanol South America CM005533.1:686158-686229:+ gene-YNCC0008W_1_CAT1 Unknown Unknown 100.0 100.0 Unannotated 2 2 0 Unknown Unknown non_coding non_coding non_coding
CAT1 GCA_001738705.1 Bioethanol South America CM005521.1:151005-151076:+ gene-YNCC0008W_CAT1 rna-YNCC0008W_CAT1 Unknown 100.0 100.0 Unannotated 2 1 0 Unknown False non_coding non_coding non_coding
CBS1585 GCA_001738375.1 Sake Asia CM005361.1:138904-138975:+ gene-YNCC0008W_2_CBS1585 Unknown Unknown 100.0 100.0 Unannotated 3 3 0 Unknown Unknown non_coding non_coding non_coding
CBS1585 GCA_001738375.1 Sake Asia CM005361.1:139153-139224:+ gene-YNCC0008W_1_CBS1585 Unknown Unknown 100.0 100.0 Unannotated 3 2 0 Unknown Unknown non_coding non_coding non_coding
CBS1585 GCA_001738375.1 Sake Asia MBVS01000051.1:86-157:- gene-YNCC0008W_CBS1585 rna-YNCC0008W_CBS1585 Unknown 100.0 100.0 Unannotated 3 1 0 Unknown False non_coding non_coding non_coding
CBS436 GCA_001738355.1 Sake Asia CM005345.1:150305-150376:+ gene-YNCC0008W_CBS436 rna-YNCC0008W_CBS436 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
CBS6412 GCA_001738345.1 Sake Asia CM005329.1:132509-132580:+ gene-YNCC0008W_CBS6412 rna-YNCC0008W_CBS6412 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
CBS6413 GCA_001738265.1 Sake Asia CM005313.1:144838-144909:+ gene-YNCC0008W_CBS6413 rna-YNCC0008W_CBS6413 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
CENPK1137D GCA_000269885.1 Laboratory Not Applicable CM001536.1:709956-710027:+ gene-YNCC0008W_CENPK1137D rna-YNCC0008W_CENPK1137D Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
EthanolRed GCA_001738615.1 Bioethanol Asia CM005473.1:142413-142484:+ gene-YNCC0008W_EthanolRed rna-YNCC0008W_EthanolRed Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
FaliES1 GCA_001738715.1 Bioethanol Asia CM005549.1:682514-682585:+ gene-YNCC0008W_1_FaliES1 Unknown Unknown 100.0 100.0 Unannotated 2 2 0 Unknown Unknown non_coding non_coding non_coding
FaliES1 GCA_001738715.1 Bioethanol Asia CM005537.1:145274-145345:+ gene-YNCC0008W_FaliES1 rna-YNCC0008W_FaliES1 Unknown 100.0 100.0 Unannotated 2 1 0 Unknown False non_coding non_coding non_coding
JAY291 GCA_000182315.2 Bioethanol South America ACFL01000232.1:1561-1632:- gene-YNCC0008W_JAY291 rna-YNCC0008W_JAY291 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
MUCL30387 GCA_001738515.1 Bread Europe CM005421.1:689784-689855:+ gene-YNCC0008W_MUCL30387 rna-YNCC0008W_MUCL30387 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
MUCL30388 GCA_001738495.1 Bread Europe CM005441.1:136882-136953:+ gene-YNCC0008W_MUCL30388 rna-YNCC0008W_MUCL30388 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
MUCL39482 GCA_001738235.1 Sake Asia CM005293.1:691303-691374:+ gene-YNCC0008W_2_MUCL39482 Unknown Unknown 100.0 100.0 Unannotated 3 3 0 Unknown Unknown non_coding non_coding non_coding
MUCL39482 GCA_001738235.1 Sake Asia MBVN01000002.1:86-157:- gene-YNCC0008W_1_MUCL39482 Unknown Unknown 100.0 100.0 Unannotated 3 2 0 Unknown Unknown non_coding non_coding non_coding
MUCL39482 GCA_001738235.1 Sake Asia CM005281.1:145477-145548:+ gene-YNCC0008W_MUCL39482 rna-YNCC0008W_MUCL39482 Unknown 100.0 100.0 Unannotated 3 1 0 Unknown False non_coding non_coding non_coding
MUCL42920 GCA_001738485.1 Bread Europe CM005437.1:700887-700958:+ gene-YNCC0008W_1_MUCL42920 Unknown Unknown 100.0 100.0 Unannotated 3 2 0 Unknown Unknown non_coding non_coding non_coding
MUCL42920 GCA_001738485.1 Bread Europe CM005438.1:371577-371648:- gene-YNCC0008W_2_MUCL42920 Unknown Unknown 100.0 100.0 Unannotated 3 3 0 Unknown Unknown non_coding non_coding non_coding
MUCL42920 GCA_001738485.1 Bread Europe CM005425.1:141594-141665:+ gene-YNCC0008W_MUCL42920 rna-YNCC0008W_MUCL42920 Unknown 100.0 100.0 Unannotated 3 1 0 Unknown False non_coding non_coding non_coding
NCIM3186 GCA_001029075.1 Bioethanol Asia CP011812.1:149552-149623:+ gene-YNCC0008W_NCIM3186 rna-YNCC0008W_NCIM3186 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
NCYC1407 GCA_001738225.1 Sake Asia CM005265.1:146743-146814:+ gene-YNCC0008W_NCYC1407 rna-YNCC0008W_NCYC1407 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
PE2H3 GCA_905220325.1 Bioethanol South America HG994142.1:150039-150110:+ gene-YNCC0008W_PE2H3 rna-YNCC0008W_PE2H3 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
PE2H4 GCA_905220315.1 Bioethanol South America LR999874.1:150577-150648:+ gene-YNCC0008W_PE2H4 rna-YNCC0008W_PE2H4 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
S288C GCF_000146045.2 Laboratory Not applicable NC_001135.5:149920-149991:+ gene-YNCC0008W_S288C rna-YNCC0008W_S288C Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
SA1 GCA_004114265.1 Bioethanol South America SDIA01000073.1:1678-1749:- gene-YNCC0008W_SA1 rna-YNCC0008W_SA1 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
ThermosaccDry GCA_001738605.1 Bioethanol Asia CM005489.1:145277-145348:+ gene-YNCC0008W_ThermosaccDry rna-YNCC0008W_ThermosaccDry Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
VR1 GCA_001738595.1 Bioethanol South America CM005457.1:156108-156179:+ gene-YNCC0008W_VR1 rna-YNCC0008W_VR1 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
ZTW1 GCA_000308935.1 Bioethanol Asia AMDD01000004.1:144279-144350:+ gene-YNCC0008W_ZTW1 rna-YNCC0008W_ZTW1 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
Sparadoxus GCF_002079055.1 Not applicable Not applicable NC_047489.1:178848-178919:- gene-YNCC0008W_Sparadoxus rna-YNCC0008W_Sparadoxus Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding

Additional files