YNCB0015W (YNCB0015W)

Gene profile

Gene name: YNCB0015W
Reference locus (S288C): YNCB0015W
Gene biotype: tRNA

Description: Unknown

Top 10 interactors (score): Unknown

Homologues (species, bitscore): Unknown

External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser

Comparative analysis of strains

Search table

strain assembly application macro_region gene_coord geneID rnaID protID %id %cov_exon status copyNumber copyID nORFs match_ref_CDS validORF missing_startCodon missing_stopCodon outOfFrame_stopCodon
AKU4011 GCA_001738255.1 Sake Asia CM005296.1:388253-388324:+ gene-YNCB0015W_AKU4011 rna-YNCB0015W_AKU4011 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
BG1 GCA_001932575.1 Bioethanol South America MSHP01000080.1:580629-580700:- gene-YNCB0015W_1_BG1 Unknown Unknown 100.0 100.0 Unannotated 2 2 0 Unknown Unknown non_coding non_coding non_coding
BG1 GCA_001932575.1 Bioethanol South America MSHP01000179.1:379241-379312:+ gene-YNCB0015W_BG1 rna-YNCB0015W_BG1 Unknown 100.0 100.0 Unannotated 2 1 0 Unknown False non_coding non_coding non_coding
Bruggeman GCA_001738585.1 Bread Not Applicable CM005504.1:389829-389900:+ gene-YNCB0015W_4_Bruggeman Unknown Unknown 100.0 100.0 Unannotated 7 5 0 Unknown Unknown non_coding non_coding non_coding
Bruggeman GCA_001738585.1 Bread Not Applicable CM005512.1:351144-351215:+ gene-YNCB0015W_1_Bruggeman Unknown Unknown 100.0 100.0 Unannotated 7 2 0 Unknown Unknown non_coding non_coding non_coding
Bruggeman GCA_001738585.1 Bread Not Applicable CM005512.1:351373-351444:+ gene-YNCB0015W_5_Bruggeman Unknown Unknown 100.0 100.0 Unannotated 7 6 0 Unknown Unknown non_coding non_coding non_coding
Bruggeman GCA_001738585.1 Bread Not Applicable MBVY01000014.1:66-137:+ gene-YNCB0015W_3_Bruggeman Unknown Unknown 100.0 100.0 Unannotated 7 4 0 Unknown Unknown non_coding non_coding non_coding
Bruggeman GCA_001738585.1 Bread Not Applicable MBVY01000309.1:368-439:- gene-YNCB0015W_6_Bruggeman Unknown Unknown 100.0 100.0 Unannotated 7 7 0 Unknown Unknown non_coding non_coding non_coding
Bruggeman GCA_001738585.1 Bread Not Applicable MBVY01000342.1:150-221:- gene-YNCB0015W_2_Bruggeman Unknown Unknown 100.0 100.0 Unannotated 7 3 0 Unknown Unknown non_coding non_coding non_coding
Bruggeman GCA_001738585.1 Bread Not Applicable CM005504.1:389488-389559:+ gene-YNCB0015W_Bruggeman rna-YNCB0015W_Bruggeman Unknown 100.0 100.0 Unannotated 7 1 0 Unknown False non_coding non_coding non_coding
CAT1 GCA_001738705.1 Bioethanol South America CM005525.1:406279-406350:+ gene-YNCB0015W_2_CAT1 Unknown Unknown 100.0 100.0 Unannotated 4 3 0 Unknown Unknown non_coding non_coding non_coding
CAT1 GCA_001738705.1 Bioethanol South America CM005525.1:406528-406599:+ gene-YNCB0015W_1_CAT1 Unknown Unknown 100.0 100.0 Unannotated 4 2 0 Unknown Unknown non_coding non_coding non_coding
CAT1 GCA_001738705.1 Bioethanol South America MBWC01000280.1:151-222:- gene-YNCB0015W_3_CAT1 Unknown Unknown 100.0 100.0 Unannotated 4 4 0 Unknown Unknown non_coding non_coding non_coding
CAT1 GCA_001738705.1 Bioethanol South America CM005520.1:392807-392878:+ gene-YNCB0015W_CAT1 rna-YNCB0015W_CAT1 Unknown 100.0 100.0 Unannotated 4 1 0 Unknown False non_coding non_coding non_coding
CBS1585 GCA_001738375.1 Sake Asia CM005360.1:380537-380608:+ gene-YNCB0015W_CBS1585 rna-YNCB0015W_CBS1585 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
CBS436 GCA_001738355.1 Sake Asia CM005344.1:388645-388716:+ gene-YNCB0015W_CBS436 rna-YNCB0015W_CBS436 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
CBS6412 GCA_001738345.1 Sake Asia CM005328.1:478767-478838:+ gene-YNCB0015W_CBS6412 rna-YNCB0015W_CBS6412 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
CBS6413 GCA_001738265.1 Sake Asia CM005312.1:385677-385748:+ gene-YNCB0015W_CBS6413 rna-YNCB0015W_CBS6413 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
CENPK1137D GCA_000269885.1 Laboratory Not Applicable CM001523.1:399636-399707:+ gene-YNCB0015W_CENPK1137D rna-YNCB0015W_CENPK1137D Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
EthanolRed GCA_001738615.1 Bioethanol Asia CM005472.1:515044-515115:+ gene-YNCB0015W_EthanolRed rna-YNCB0015W_EthanolRed Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
FaliES1 GCA_001738715.1 Bioethanol Asia CM005544.1:353259-353330:+ gene-YNCB0015W_1_FaliES1 Unknown Unknown 100.0 100.0 Unannotated 3 2 0 Unknown Unknown non_coding non_coding non_coding
FaliES1 GCA_001738715.1 Bioethanol Asia MBWD01000051.1:357-428:+ gene-YNCB0015W_2_FaliES1 Unknown Unknown 100.0 100.0 Unannotated 3 3 0 Unknown Unknown non_coding non_coding non_coding
FaliES1 GCA_001738715.1 Bioethanol Asia CM005536.1:404327-404398:+ gene-YNCB0015W_FaliES1 rna-YNCB0015W_FaliES1 Unknown 100.0 100.0 Unannotated 3 1 0 Unknown False non_coding non_coding non_coding
MUCL30387 GCA_001738515.1 Bread Europe MBVX01000360.1:541-612:+ gene-YNCB0015W_1_MUCL30387 Unknown Unknown 100.0 100.0 Unannotated 2 2 0 Unknown Unknown non_coding non_coding non_coding
MUCL30387 GCA_001738515.1 Bread Europe CM005408.1:390891-390962:+ gene-YNCB0015W_MUCL30387 rna-YNCB0015W_MUCL30387 Unknown 100.0 100.0 Unannotated 2 1 0 Unknown False non_coding non_coding non_coding
MUCL30388 GCA_001738495.1 Bread Europe CM005440.1:390673-390744:+ gene-YNCB0015W_MUCL30388 rna-YNCB0015W_MUCL30388 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
MUCL39482 GCA_001738235.1 Sake Asia CM005280.1:380529-380600:+ gene-YNCB0015W_MUCL39482 rna-YNCB0015W_MUCL39482 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
MUCL42920 GCA_001738485.1 Bread Europe CM005429.1:413218-413289:+ gene-YNCB0015W_1_MUCL42920 Unknown Unknown 100.0 100.0 Unannotated 2 2 0 Unknown Unknown non_coding non_coding non_coding
MUCL42920 GCA_001738485.1 Bread Europe CM005424.1:387742-387813:+ gene-YNCB0015W_MUCL42920 rna-YNCB0015W_MUCL42920 Unknown 100.0 100.0 Unannotated 2 1 0 Unknown False non_coding non_coding non_coding
NCIM3186 GCA_001029075.1 Bioethanol Asia CP011811.1:405675-405746:+ gene-YNCB0015W_NCIM3186 rna-YNCB0015W_NCIM3186 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
NCYC1407 GCA_001738225.1 Sake Asia CM005264.1:381461-381532:+ gene-YNCB0015W_NCYC1407 rna-YNCB0015W_NCYC1407 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
PE2H3 GCA_905220325.1 Bioethanol South America HG994141.1:394041-394112:+ gene-YNCB0015W_PE2H3 rna-YNCB0015W_PE2H3 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
PE2H4 GCA_905220315.1 Bioethanol South America LR999873.1:391717-391788:+ gene-YNCB0015W_PE2H4 rna-YNCB0015W_PE2H4 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
S288C GCF_000146045.2 Laboratory Not applicable NC_001134.8:405878-405949:+ gene-YNCB0015W_S288C rna-YNCB0015W_S288C Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
SA1 GCA_004114265.1 Bioethanol South America SDIA01000017.1:71570-71641:- gene-YNCB0015W_SA1 rna-YNCB0015W_SA1 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
ThermosaccDry GCA_001738605.1 Bioethanol Asia CM005488.1:403334-403405:+ gene-YNCB0015W_ThermosaccDry rna-YNCB0015W_ThermosaccDry Unknown 100.0 100.0 Unannotated 3 1 0 Unknown False non_coding non_coding non_coding
ThermosaccDry GCA_001738605.1 Bioethanol Asia CM005496.1:347170-347241:+ gene-YNCB0015W_2_ThermosaccDry Unknown Unknown 100.0 100.0 Unannotated 3 3 0 Unknown Unknown non_coding non_coding non_coding
ThermosaccDry GCA_001738605.1 Bioethanol Asia MBWA01000112.1:357-428:+ gene-YNCB0015W_1_ThermosaccDry Unknown Unknown 100.0 100.0 Unannotated 3 2 0 Unknown Unknown non_coding non_coding non_coding
VR1 GCA_001738595.1 Bioethanol South America CM005456.1:385321-385392:+ gene-YNCB0015W_VR1 rna-YNCB0015W_VR1 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
ZTW1 GCA_000308935.1 Bioethanol Asia AMDD01000003.1:379003-379074:+ gene-YNCB0015W_ZTW1 rna-YNCB0015W_ZTW1 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
Sparadoxus GCF_002079055.1 Not applicable Not applicable NC_047488.1:415943-416014:+ gene-YNCB0015W_Sparadoxus rna-YNCB0015W_Sparadoxus Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding

Additional files