YNCB0005C (YNCB0005C)

Gene profile

Gene name: YNCB0005C
Reference locus (S288C): YNCB0005C
Gene biotype: tRNA

Description: Unknown

Top 10 interactors (score): Unknown

Homologues (species, bitscore): Unknown

External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser

Comparative analysis of strains

Search table

strain assembly application macro_region gene_coord geneID rnaID protID %id %cov_exon status copyNumber copyID nORFs match_ref_CDS validORF missing_startCodon missing_stopCodon outOfFrame_stopCodon
CAT1 GCA_001738705.1 Bioethanol South America CM005520.1:194915-194985:- gene-YNCB0005C_2_CAT1 Unknown Unknown 100.0 100.0 Unannotated 7 3 0 Unknown Unknown non_coding non_coding non_coding
CAT1 GCA_001738705.1 Bioethanol South America CM005522.1:959136-959206:+ gene-YNCB0005C_5_CAT1 Unknown Unknown 100.0 100.0 Unannotated 7 6 0 Unknown Unknown non_coding non_coding non_coding
CAT1 GCA_001738705.1 Bioethanol South America CM005522.1:1130535-1130605:+ gene-YNCB0005C_1_CAT1 Unknown Unknown 100.0 100.0 Unannotated 7 2 0 Unknown Unknown non_coding non_coding non_coding
CAT1 GCA_001738705.1 Bioethanol South America MBWC01000049.1:4267-4337:+ gene-YNCB0005C_4_CAT1 Unknown Unknown 100.0 100.0 Unannotated 7 5 0 Unknown Unknown non_coding non_coding non_coding
CAT1 GCA_001738705.1 Bioethanol South America MBWC01000228.1:246-316:- gene-YNCB0005C_3_CAT1 Unknown Unknown 100.0 100.0 Unannotated 7 4 0 Unknown Unknown non_coding non_coding non_coding
CAT1 GCA_001738705.1 Bioethanol South America MBWC01000388.1:156-226:- gene-YNCB0005C_6_CAT1 Unknown Unknown 100.0 100.0 Unannotated 7 7 0 Unknown Unknown non_coding non_coding non_coding
CAT1 GCA_001738705.1 Bioethanol South America CM005520.1:194666-194736:- gene-YNCB0005C_CAT1 rna-YNCB0005C_CAT1 Unknown 100.0 100.0 Unannotated 7 1 0 Unknown False non_coding non_coding non_coding
CBS1585 GCA_001738375.1 Sake Asia CM005360.1:183799-183869:- gene-YNCB0005C_CBS1585 rna-YNCB0005C_CBS1585 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
CBS6413 GCA_001738265.1 Sake Asia CM005312.1:189369-189439:- gene-YNCB0005C_CBS6413 rna-YNCB0005C_CBS6413 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
MUCL30388 GCA_001738495.1 Bread Europe CM005440.1:192729-192799:- gene-YNCB0005C_MUCL30388 rna-YNCB0005C_MUCL30388 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
MUCL39482 GCA_001738235.1 Sake Asia CM005280.1:183984-184054:- gene-YNCB0005C_MUCL39482 rna-YNCB0005C_MUCL39482 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
NCIM3186 GCA_001029075.1 Bioethanol Asia CP011811.1:197426-197496:- gene-YNCB0005C_NCIM3186 rna-YNCB0005C_NCIM3186 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
NCYC1407 GCA_001738225.1 Sake Asia CM005264.1:185133-185203:- gene-YNCB0005C_NCYC1407 rna-YNCB0005C_NCYC1407 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
PE2H3 GCA_905220325.1 Bioethanol South America HG994141.1:197302-197372:- gene-YNCB0005C_PE2H3 rna-YNCB0005C_PE2H3 Unknown 98.5 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
PE2H4 GCA_905220315.1 Bioethanol South America LR999875.1:960574-960644:+ gene-YNCB0005C_PE2H4 rna-YNCB0005C_PE2H4 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
S288C GCF_000146045.2 Laboratory Not applicable NC_001134.8:197629-197699:- gene-YNCB0005C_S288C rna-YNCB0005C_S288C Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
ThermosaccDry GCA_001738605.1 Bioethanol Asia CM005488.1:206501-206571:- gene-YNCB0005C_ThermosaccDry rna-YNCB0005C_ThermosaccDry Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
VR1 GCA_001738595.1 Bioethanol South America CM005458.1:971753-971823:+ gene-YNCB0005C_1_VR1 Unknown Unknown 100.0 100.0 Unannotated 2 2 0 Unknown Unknown non_coding non_coding non_coding
VR1 GCA_001738595.1 Bioethanol South America CM005456.1:188640-188710:- gene-YNCB0005C_VR1 rna-YNCB0005C_VR1 Unknown 100.0 100.0 Unannotated 2 1 0 Unknown False non_coding non_coding non_coding
Sparadoxus GCF_002079055.1 Not applicable Not applicable NC_047488.1:218428-218498:- gene-YNCB0005C_Sparadoxus rna-YNCB0005C_Sparadoxus Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding

Additional files