YNCB0004W (YNCB0004W)

Gene profile

Gene name: YNCB0004W
Reference locus (S288C): YNCB0004W
Gene biotype: tRNA

Description: Unknown

Top 10 interactors (score): Unknown

Homologues (species, bitscore): Unknown

External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser

Comparative analysis of strains

Search table

strain assembly application macro_region gene_coord geneID rnaID protID %id %cov_exon status copyNumber copyID nORFs match_ref_CDS validORF missing_startCodon missing_stopCodon outOfFrame_stopCodon
AKU4011 GCA_001738255.1 Sake Asia CM005296.1:191598-191671:+ gene-YNCB0004W_AKU4011 rna-YNCB0004W_AKU4011 Unknown 100.0 100.0 Unannotated 2 1 0 Unknown False non_coding non_coding non_coding
AKU4011 GCA_001738255.1 Sake Asia CM005308.1:585245-585318:+ gene-YNCB0004W_1_AKU4011 Unknown Unknown 100.0 100.0 Unannotated 2 2 0 Unknown Unknown non_coding non_coding non_coding
BG1 GCA_001932575.1 Bioethanol South America MSHP01000179.1:181931-182004:+ gene-YNCB0004W_BG1 rna-YNCB0004W_BG1 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
Bruggeman GCA_001738585.1 Bread Not Applicable CM005511.1:212500-212573:+ gene-YNCB0004W_1_Bruggeman Unknown Unknown 100.0 100.0 Unannotated 7 2 0 Unknown Unknown non_coding non_coding non_coding
Bruggeman GCA_001738585.1 Bread Not Applicable CM005511.1:212749-212822:+ gene-YNCB0004W_2_Bruggeman Unknown Unknown 100.0 100.0 Unannotated 7 3 0 Unknown Unknown non_coding non_coding non_coding
Bruggeman GCA_001738585.1 Bread Not Applicable CM005514.1:1029954-1030027:- gene-YNCB0004W_6_Bruggeman Unknown Unknown 100.0 100.0 Unannotated 7 7 0 Unknown Unknown non_coding non_coding non_coding
Bruggeman GCA_001738585.1 Bread Not Applicable CM005518.1:915015-915088:- gene-YNCB0004W_5_Bruggeman Unknown Unknown 100.0 100.0 Unannotated 7 6 0 Unknown Unknown non_coding non_coding non_coding
Bruggeman GCA_001738585.1 Bread Not Applicable CM005518.1:915541-915614:- gene-YNCB0004W_4_Bruggeman Unknown Unknown 100.0 100.0 Unannotated 7 5 0 Unknown Unknown non_coding non_coding non_coding
Bruggeman GCA_001738585.1 Bread Not Applicable MBVY01000280.1:146-219:- gene-YNCB0004W_3_Bruggeman Unknown Unknown 100.0 100.0 Unannotated 7 4 0 Unknown Unknown non_coding non_coding non_coding
Bruggeman GCA_001738585.1 Bread Not Applicable CM005504.1:192078-192151:+ gene-YNCB0004W_Bruggeman rna-YNCB0004W_Bruggeman Unknown 100.0 100.0 Unannotated 7 1 0 Unknown False non_coding non_coding non_coding
CAT1 GCA_001738705.1 Bioethanol South America CM005522.1:657493-657566:- gene-YNCB0004W_1_CAT1 Unknown Unknown 100.0 100.0 Unannotated 5 2 0 Unknown Unknown non_coding non_coding non_coding
CAT1 GCA_001738705.1 Bioethanol South America CM005527.1:203032-203105:+ gene-YNCB0004W_4_CAT1 Unknown Unknown 100.0 100.0 Unannotated 5 5 0 Unknown Unknown non_coding non_coding non_coding
CAT1 GCA_001738705.1 Bioethanol South America MBWC01000245.1:356-429:+ gene-YNCB0004W_2_CAT1 Unknown Unknown 100.0 100.0 Unannotated 5 3 0 Unknown Unknown non_coding non_coding non_coding
CAT1 GCA_001738705.1 Bioethanol South America MBWC01000257.1:353-426:+ gene-YNCB0004W_3_CAT1 Unknown Unknown 100.0 100.0 Unannotated 5 4 0 Unknown Unknown non_coding non_coding non_coding
CAT1 GCA_001738705.1 Bioethanol South America CM005520.1:194292-194365:+ gene-YNCB0004W_CAT1 rna-YNCB0004W_CAT1 Unknown 100.0 100.0 Unannotated 5 1 0 Unknown False non_coding non_coding non_coding
CBS1585 GCA_001738375.1 Sake Asia CM005360.1:183664-183737:+ gene-YNCB0004W_CBS1585 rna-YNCB0004W_CBS1585 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
CBS436 GCA_001738355.1 Sake Asia CM005356.1:653075-653148:+ gene-YNCB0004W_1_CBS436 Unknown Unknown 100.0 100.0 Unannotated 2 2 0 Unknown Unknown non_coding non_coding non_coding
CBS436 GCA_001738355.1 Sake Asia CM005344.1:192104-192177:+ gene-YNCB0004W_CBS436 rna-YNCB0004W_CBS436 Unknown 100.0 100.0 Unannotated 2 1 0 Unknown False non_coding non_coding non_coding
CBS6412 GCA_001738345.1 Sake Asia CM005328.1:282386-282459:+ gene-YNCB0004W_CBS6412 rna-YNCB0004W_CBS6412 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
CBS6413 GCA_001738265.1 Sake Asia CM005319.1:198824-198897:+ gene-YNCB0004W_2_CBS6413 Unknown Unknown 100.0 100.0 Unannotated 4 3 0 Unknown Unknown non_coding non_coding non_coding
CBS6413 GCA_001738265.1 Sake Asia CM005324.1:549178-549251:- gene-YNCB0004W_1_CBS6413 Unknown Unknown 100.0 100.0 Unannotated 4 2 0 Unknown Unknown non_coding non_coding non_coding
CBS6413 GCA_001738265.1 Sake Asia MBVP01000058.1:33-106:- gene-YNCB0004W_3_CBS6413 Unknown Unknown 100.0 100.0 Unannotated 4 4 0 Unknown Unknown non_coding non_coding non_coding
CBS6413 GCA_001738265.1 Sake Asia CM005312.1:189234-189307:+ gene-YNCB0004W_CBS6413 rna-YNCB0004W_CBS6413 Unknown 100.0 100.0 Unannotated 4 1 0 Unknown False non_coding non_coding non_coding
EthanolRed GCA_001738615.1 Bioethanol Asia CM005472.1:318809-318882:+ gene-YNCB0004W_EthanolRed rna-YNCB0004W_EthanolRed Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
FaliES1 GCA_001738715.1 Bioethanol Asia CM005536.1:206410-206483:+ gene-YNCB0004W_FaliES1 rna-YNCB0004W_FaliES1 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
JAY291 GCA_000182315.2 Bioethanol South America ACFL01000437.1:120-193:+ gene-YNCB0004W_JAY291 rna-YNCB0004W_JAY291 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
MUCL30387 GCA_001738515.1 Bread Europe CM005418.1:1029433-1029506:- gene-YNCB0004W_2_MUCL30387 Unknown Unknown 100.0 100.0 Unannotated 6 3 0 Unknown Unknown non_coding non_coding non_coding
MUCL30387 GCA_001738515.1 Bread Europe CM005420.1:600040-600113:+ gene-YNCB0004W_4_MUCL30387 Unknown Unknown 100.0 100.0 Unannotated 6 5 0 Unknown Unknown non_coding non_coding non_coding
MUCL30387 GCA_001738515.1 Bread Europe CM005422.1:883100-883173:- gene-YNCB0004W_3_MUCL30387 Unknown Unknown 100.0 100.0 Unannotated 6 4 0 Unknown Unknown non_coding non_coding non_coding
MUCL30387 GCA_001738515.1 Bread Europe MBVX01000080.1:156-229:+ gene-YNCB0004W_5_MUCL30387 Unknown Unknown 100.0 100.0 Unannotated 6 6 0 Unknown Unknown non_coding non_coding non_coding
MUCL30387 GCA_001738515.1 Bread Europe MBVX01000180.1:146-219:- gene-YNCB0004W_1_MUCL30387 Unknown Unknown 100.0 100.0 Unannotated 6 2 0 Unknown Unknown non_coding non_coding non_coding
MUCL30387 GCA_001738515.1 Bread Europe CM005408.1:192715-192788:+ gene-YNCB0004W_MUCL30387 rna-YNCB0004W_MUCL30387 Unknown 100.0 100.0 Unannotated 6 1 0 Unknown False non_coding non_coding non_coding
MUCL30388 GCA_001738495.1 Bread Europe CM005454.1:856503-856576:- gene-YNCB0004W_1_MUCL30388 Unknown Unknown 100.0 100.0 Unannotated 2 2 0 Unknown Unknown non_coding non_coding non_coding
MUCL30388 GCA_001738495.1 Bread Europe CM005440.1:192594-192667:+ gene-YNCB0004W_MUCL30388 rna-YNCB0004W_MUCL30388 Unknown 100.0 100.0 Unannotated 2 1 0 Unknown False non_coding non_coding non_coding
MUCL39482 GCA_001738235.1 Sake Asia CM005280.1:183849-183922:+ gene-YNCB0004W_MUCL39482 rna-YNCB0004W_MUCL39482 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
MUCL42920 GCA_001738485.1 Bread Europe CM005431.1:211112-211185:+ gene-YNCB0004W_1_MUCL42920 Unknown Unknown 100.0 100.0 Unannotated 3 2 0 Unknown Unknown non_coding non_coding non_coding
MUCL42920 GCA_001738485.1 Bread Europe CM005436.1:586381-586454:+ gene-YNCB0004W_2_MUCL42920 Unknown Unknown 100.0 100.0 Unannotated 3 3 0 Unknown Unknown non_coding non_coding non_coding
MUCL42920 GCA_001738485.1 Bread Europe CM005424.1:191116-191189:+ gene-YNCB0004W_MUCL42920 rna-YNCB0004W_MUCL42920 Unknown 100.0 100.0 Unannotated 3 1 0 Unknown False non_coding non_coding non_coding
NCIM3186 GCA_001029075.1 Bioethanol Asia CP011811.1:197291-197364:+ gene-YNCB0004W_NCIM3186 rna-YNCB0004W_NCIM3186 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
NCYC1407 GCA_001738225.1 Sake Asia CM005264.1:184998-185071:+ gene-YNCB0004W_NCYC1407 rna-YNCB0004W_NCYC1407 Unknown 100.0 100.0 Unannotated 2 1 0 Unknown False non_coding non_coding non_coding
NCYC1407 GCA_001738225.1 Sake Asia CM005276.1:584730-584803:+ gene-YNCB0004W_1_NCYC1407 Unknown Unknown 100.0 100.0 Unannotated 2 2 0 Unknown Unknown non_coding non_coding non_coding
PE2H3 GCA_905220325.1 Bioethanol South America HG994141.1:197177-197250:+ gene-YNCB0004W_PE2H3 rna-YNCB0004W_PE2H3 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
PE2H4 GCA_905220315.1 Bioethanol South America LR999873.1:194821-194894:+ gene-YNCB0004W_PE2H4 rna-YNCB0004W_PE2H4 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
S288C GCF_000146045.2 Laboratory Not applicable NC_001134.8:197494-197567:+ gene-YNCB0004W_S288C rna-YNCB0004W_S288C Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
SA1 GCA_004114265.1 Bioethanol South America SDIA01000051.1:82205-82278:+ gene-YNCB0004W_SA1 rna-YNCB0004W_SA1 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
ThermosaccDry GCA_001738605.1 Bioethanol Asia CM005488.1:206365-206438:+ gene-YNCB0004W_ThermosaccDry rna-YNCB0004W_ThermosaccDry Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
VR1 GCA_001738595.1 Bioethanol South America CM005470.1:809258-809331:+ gene-YNCB0004W_1_VR1 Unknown Unknown 100.0 100.0 Unannotated 2 2 0 Unknown Unknown non_coding non_coding non_coding
VR1 GCA_001738595.1 Bioethanol South America CM005456.1:188515-188588:+ gene-YNCB0004W_VR1 rna-YNCB0004W_VR1 Unknown 100.0 100.0 Unannotated 2 1 0 Unknown False non_coding non_coding non_coding
Sparadoxus GCF_002079055.1 Not applicable Not applicable NC_047488.1:218254-218327:+ gene-YNCB0004W_Sparadoxus rna-YNCB0004W_Sparadoxus Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding

Additional files