YNCB0002W (YNCB0002W)

Gene profile

Gene name: YNCB0002W
Reference locus (S288C): YNCB0002W
Gene biotype: tRNA

Description: Unknown

Top 10 interactors (score): Unknown

Homologues (species, bitscore): Unknown

External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser

Comparative analysis of strains

Search table

strain assembly application macro_region gene_coord geneID rnaID protID %id %cov_exon status copyNumber copyID nORFs match_ref_CDS validORF missing_startCodon missing_stopCodon outOfFrame_stopCodon
AKU4011 GCA_001738255.1 Sake Asia CM005296.1:29967-30057:+ gene-YNCB0002W_AKU4011 rna-YNCB0002W_AKU4011 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
BG1 GCA_001932575.1 Bioethanol South America MSHP01000179.1:20669-20759:+ gene-YNCB0002W_BG1 rna-YNCB0002W_BG1 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
Bruggeman GCA_001738585.1 Bread Not Applicable CM005504.1:30351-30441:+ gene-YNCB0002W_1_Bruggeman Unknown Unknown 100.0 100.0 Unannotated 5 2 0 Unknown Unknown non_coding non_coding non_coding
Bruggeman GCA_001738585.1 Bread Not Applicable CM005504.1:30600-30690:+ gene-YNCB0002W_2_Bruggeman Unknown Unknown 100.0 100.0 Unannotated 5 3 0 Unknown Unknown non_coding non_coding non_coding
Bruggeman GCA_001738585.1 Bread Not Applicable MBVY01000359.1:440-531:- gene-YNCB0002W_4_Bruggeman Unknown Unknown 100.0 100.0 Unannotated 5 5 0 Unknown Unknown non_coding non_coding non_coding
Bruggeman GCA_001738585.1 Bread Not Applicable MBVY01000393.1:262-353:+ gene-YNCB0002W_3_Bruggeman Unknown Unknown 100.0 100.0 Unannotated 5 4 0 Unknown Unknown non_coding non_coding non_coding
Bruggeman GCA_001738585.1 Bread Not Applicable MBVY01000019.1:118-208:- gene-YNCB0002W_Bruggeman rna-YNCB0002W_Bruggeman Unknown 100.0 100.0 Unannotated 5 1 0 Unknown False non_coding non_coding non_coding
CAT1 GCA_001738705.1 Bioethanol South America CM005534.1:651940-652031:- gene-YNCB0002W_1_CAT1 Unknown Unknown 100.0 100.0 Unannotated 2 2 0 Unknown Unknown non_coding non_coding non_coding
CAT1 GCA_001738705.1 Bioethanol South America CM005520.1:32531-32621:+ gene-YNCB0002W_CAT1 rna-YNCB0002W_CAT1 Unknown 100.0 100.0 Unannotated 2 1 0 Unknown False non_coding non_coding non_coding
CBS1585 GCA_001738375.1 Sake Asia CM005360.1:22038-22128:+ gene-YNCB0002W_CBS1585 rna-YNCB0002W_CBS1585 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
CBS436 GCA_001738355.1 Sake Asia CM005344.1:30850-30940:+ gene-YNCB0002W_CBS436 rna-YNCB0002W_CBS436 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
CBS6412 GCA_001738345.1 Sake Asia CM005328.1:21826-21916:+ gene-YNCB0002W_CBS6412 rna-YNCB0002W_CBS6412 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
CBS6413 GCA_001738265.1 Sake Asia CM005312.1:28168-28258:+ gene-YNCB0002W_CBS6413 rna-YNCB0002W_CBS6413 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
CENPK1137D GCA_000269885.1 Laboratory Not Applicable CM001523.1:30018-30108:+ gene-YNCB0002W_CENPK1137D rna-YNCB0002W_CENPK1137D Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
EthanolRed GCA_001738615.1 Bioethanol Asia CM005472.1:44210-44300:+ gene-YNCB0002W_EthanolRed rna-YNCB0002W_EthanolRed Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
FaliES1 GCA_001738715.1 Bioethanol Asia CM005536.1:44342-44432:+ gene-YNCB0002W_FaliES1 rna-YNCB0002W_FaliES1 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
JAY291 GCA_000182315.2 Bioethanol South America ACFL01000184.1:21362-21452:+ gene-YNCB0002W_JAY291 rna-YNCB0002W_JAY291 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
MUCL30387 GCA_001738515.1 Bread Europe CM005408.1:29483-29573:+ gene-YNCB0002W_2_MUCL30387 Unknown Unknown 100.0 100.0 Unannotated 4 3 0 Unknown Unknown non_coding non_coding non_coding
MUCL30387 GCA_001738515.1 Bread Europe CM005408.1:29732-29822:+ gene-YNCB0002W_1_MUCL30387 Unknown Unknown 100.0 100.0 Unannotated 4 2 0 Unknown Unknown non_coding non_coding non_coding
MUCL30387 GCA_001738515.1 Bread Europe MBVX01000088.1:185-276:+ gene-YNCB0002W_3_MUCL30387 Unknown Unknown 100.0 100.0 Unannotated 4 4 0 Unknown Unknown non_coding non_coding non_coding
MUCL30387 GCA_001738515.1 Bread Europe MBVX01000297.1:118-208:- gene-YNCB0002W_MUCL30387 rna-YNCB0002W_MUCL30387 Unknown 100.0 100.0 Unannotated 4 1 0 Unknown False non_coding non_coding non_coding
MUCL30388 GCA_001738495.1 Bread Europe CM005446.1:352624-352715:- gene-YNCB0002W_1_MUCL30388 Unknown Unknown 100.0 100.0 Unannotated 2 2 0 Unknown Unknown non_coding non_coding non_coding
MUCL30388 GCA_001738495.1 Bread Europe CM005440.1:30388-30478:+ gene-YNCB0002W_MUCL30388 rna-YNCB0002W_MUCL30388 Unknown 100.0 100.0 Unannotated 2 1 0 Unknown False non_coding non_coding non_coding
MUCL39482 GCA_001738235.1 Sake Asia CM005280.1:22194-22284:+ gene-YNCB0002W_MUCL39482 rna-YNCB0002W_MUCL39482 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
MUCL42920 GCA_001738485.1 Bread Europe CM005424.1:28835-28925:+ gene-YNCB0002W_1_MUCL42920 Unknown Unknown 100.0 100.0 Unannotated 3 2 0 Unknown Unknown non_coding non_coding non_coding
MUCL42920 GCA_001738485.1 Bread Europe CM005438.1:588878-588969:- gene-YNCB0002W_2_MUCL42920 Unknown Unknown 100.0 100.0 Unannotated 3 3 0 Unknown Unknown non_coding non_coding non_coding
MUCL42920 GCA_001738485.1 Bread Europe MBVV01000356.1:259-349:- gene-YNCB0002W_MUCL42920 rna-YNCB0002W_MUCL42920 Unknown 100.0 100.0 Unannotated 3 1 0 Unknown False non_coding non_coding non_coding
NCIM3186 GCA_001029075.1 Bioethanol Asia CP011811.1:36195-36285:+ gene-YNCB0002W_NCIM3186 rna-YNCB0002W_NCIM3186 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
NCYC1407 GCA_001738225.1 Sake Asia CM005264.1:23866-23956:+ gene-YNCB0002W_NCYC1407 rna-YNCB0002W_NCYC1407 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
PE2H3 GCA_905220325.1 Bioethanol South America HG994141.1:30152-30242:+ gene-YNCB0002W_PE2H3 rna-YNCB0002W_PE2H3 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
PE2H4 GCA_905220315.1 Bioethanol South America LR999873.1:27784-27874:+ gene-YNCB0002W_PE2H4 rna-YNCB0002W_PE2H4 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
S288C GCF_000146045.2 Laboratory Not applicable NC_001134.8:36398-36488:+ gene-YNCB0002W_S288C rna-YNCB0002W_S288C Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
SA1 GCA_004114265.1 Bioethanol South America SDIA01000004.1:20476-20566:+ gene-YNCB0002W_SA1 rna-YNCB0002W_SA1 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
ThermosaccDry GCA_001738605.1 Bioethanol Asia CM005488.1:44304-44394:+ gene-YNCB0002W_ThermosaccDry rna-YNCB0002W_ThermosaccDry Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
VR1 GCA_001738595.1 Bioethanol South America CM005456.1:26497-26587:+ gene-YNCB0002W_VR1 rna-YNCB0002W_VR1 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
ZTW1 GCA_000308935.1 Bioethanol Asia AMDD01000003.1:21528-21618:+ gene-YNCB0002W_ZTW1 rna-YNCB0002W_ZTW1 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
Sparadoxus GCF_002079055.1 Not applicable Not applicable NC_047488.1:56293-56384:+ gene-YNCB0002W_Sparadoxus rna-YNCB0002W_Sparadoxus Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding

Additional files