YNCB0001W (YNCB0001W)

Gene profile

Gene name: YNCB0001W
Reference locus (S288C): YNCB0001W
Gene biotype: tRNA

Description: Unknown

Top 10 interactors (score): Unknown

Homologues (species, bitscore): Unknown

External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser

Comparative analysis of strains

Search table

strain assembly application macro_region gene_coord geneID rnaID protID %id %cov_exon status copyNumber copyID nORFs match_ref_CDS validORF missing_startCodon missing_stopCodon outOfFrame_stopCodon
AKU4011 GCA_001738255.1 Sake Asia CM005296.1:9484-9567:+ gene-YNCB0001W_AKU4011 rna-YNCB0001W_AKU4011 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
BG1 GCA_001932575.1 Bioethanol South America MSHP01000179.1:204-287:+ gene-YNCB0001W_BG1 rna-YNCB0001W_BG1 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
Bruggeman GCA_001738585.1 Bread Not Applicable CM005506.1:528658-528741:+ gene-YNCB0001W_1_Bruggeman Unknown Unknown 100.0 100.0 Unannotated 2 2 0 Unknown Unknown non_coding non_coding non_coding
Bruggeman GCA_001738585.1 Bread Not Applicable CM005504.1:9866-9949:+ gene-YNCB0001W_Bruggeman rna-YNCB0001W_Bruggeman Unknown 100.0 100.0 Unannotated 2 1 0 Unknown False non_coding non_coding non_coding
CAT1 GCA_001738705.1 Bioethanol South America CM005520.1:12070-12153:+ gene-YNCB0001W_CAT1 rna-YNCB0001W_CAT1 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
CBS1585 GCA_001738375.1 Sake Asia CM005360.1:1555-1638:+ gene-YNCB0001W_CBS1585 rna-YNCB0001W_CBS1585 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
CBS436 GCA_001738355.1 Sake Asia CM005353.1:81800-81883:+ gene-YNCB0001W_CBS436 rna-YNCB0001W_CBS436 Unknown 98.8 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
CBS6412 GCA_001738345.1 Sake Asia CM005330.1:492827-492910:+ gene-YNCB0001W_CBS6412 rna-YNCB0001W_CBS6412 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
CBS6413 GCA_001738265.1 Sake Asia CM005312.1:7685-7768:+ gene-YNCB0001W_CBS6413 rna-YNCB0001W_CBS6413 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
EthanolRed GCA_001738615.1 Bioethanol Asia CM005474.1:507349-507432:+ gene-YNCB0001W_EthanolRed rna-YNCB0001W_EthanolRed Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
FaliES1 GCA_001738715.1 Bioethanol Asia CM005536.1:23855-23938:+ gene-YNCB0001W_FaliES1 rna-YNCB0001W_FaliES1 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
JAY291 GCA_000182315.2 Bioethanol South America ACFL01000209.1:13941-14024:+ gene-YNCB0001W_JAY291 rna-YNCB0001W_JAY291 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
MUCL30387 GCA_001738515.1 Bread Europe CM005408.1:9008-9091:+ gene-YNCB0001W_MUCL30387 rna-YNCB0001W_MUCL30387 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
MUCL30388 GCA_001738495.1 Bread Europe CM005442.1:504843-504926:+ gene-YNCB0001W_1_MUCL30388 Unknown Unknown 100.0 100.0 Unannotated 2 2 0 Unknown Unknown non_coding non_coding non_coding
MUCL30388 GCA_001738495.1 Bread Europe CM005440.1:9112-9195:+ gene-YNCB0001W_MUCL30388 rna-YNCB0001W_MUCL30388 Unknown 100.0 100.0 Unannotated 2 1 0 Unknown False non_coding non_coding non_coding
MUCL39482 GCA_001738235.1 Sake Asia CM005280.1:1711-1794:+ gene-YNCB0001W_MUCL39482 rna-YNCB0001W_MUCL39482 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
MUCL42920 GCA_001738485.1 Bread Europe CM005426.1:419312-419395:+ gene-YNCB0001W_2_MUCL42920 Unknown Unknown 100.0 100.0 Unannotated 3 3 0 Unknown Unknown non_coding non_coding non_coding
MUCL42920 GCA_001738485.1 Bread Europe CM005436.1:712926-713009:- gene-YNCB0001W_1_MUCL42920 Unknown Unknown 100.0 100.0 Unannotated 3 2 0 Unknown Unknown non_coding non_coding non_coding
MUCL42920 GCA_001738485.1 Bread Europe CM005424.1:8349-8432:+ gene-YNCB0001W_MUCL42920 rna-YNCB0001W_MUCL42920 Unknown 100.0 100.0 Unannotated 3 1 0 Unknown False non_coding non_coding non_coding
NCIM3186 GCA_001029075.1 Bioethanol Asia CP011811.1:9380-9463:+ gene-YNCB0001W_NCIM3186 rna-YNCB0001W_NCIM3186 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
NCYC1407 GCA_001738225.1 Sake Asia CM005264.1:3383-3466:+ gene-YNCB0001W_NCYC1407 rna-YNCB0001W_NCYC1407 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
PE2H3 GCA_905220325.1 Bioethanol South America HG994141.1:9687-9770:+ gene-YNCB0001W_PE2H3 rna-YNCB0001W_PE2H3 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
PE2H4 GCA_905220315.1 Bioethanol South America LR999873.1:7319-7402:+ gene-YNCB0001W_PE2H4 rna-YNCB0001W_PE2H4 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
S288C GCF_000146045.2 Laboratory Not applicable NC_001134.8:9583-9666:+ gene-YNCB0001W_S288C rna-YNCB0001W_S288C Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
SA1 GCA_004114265.1 Bioethanol South America SDIA01000004.1:2-85:+ gene-YNCB0001W_SA1 rna-YNCB0001W_SA1 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
ThermosaccDry GCA_001738605.1 Bioethanol Asia CM005488.1:23817-23900:+ gene-YNCB0001W_ThermosaccDry rna-YNCB0001W_ThermosaccDry Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
VR1 GCA_001738595.1 Bioethanol South America CM005458.1:518122-518205:+ gene-YNCB0001W_1_VR1 Unknown Unknown 100.0 100.0 Unannotated 3 2 0 Unknown Unknown non_coding non_coding non_coding
VR1 GCA_001738595.1 Bioethanol South America CM005464.1:419725-419808:- gene-YNCB0001W_2_VR1 Unknown Unknown 100.0 100.0 Unannotated 3 3 0 Unknown Unknown non_coding non_coding non_coding
VR1 GCA_001738595.1 Bioethanol South America CM005468.1:745265-745348:- gene-YNCB0001W_VR1 rna-YNCB0001W_VR1 Unknown 100.0 100.0 Unannotated 3 1 0 Unknown False non_coding non_coding non_coding
ZTW1 GCA_000308935.1 Bioethanol Asia AMDD01000003.1:1044-1127:+ gene-YNCB0001W_ZTW1 rna-YNCB0001W_ZTW1 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
Sparadoxus GCF_002079055.1 Not applicable Not applicable NC_047488.1:35945-36028:+ gene-YNCB0001W_Sparadoxus rna-YNCB0001W_Sparadoxus Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding

Additional files