YMR315W (YMR315W)


Gene profile

Gene name: YMR315W
Reference locus (S288C): YMR315W
Gene biotype: protein_coding

Description: Uncharacterized protein YMR315W; Protein with NADP(H) oxidoreductase activity; transcription is regulated by Stb5p in response to NADPH depletion induced by diamide; promoter contains a putative Stb5p binding site; protein abundance increases in response to DNA replication stress

Top 10 interactors (score): ZWF1 (0.844); GDS1 (0.71); GOR1 (0.707); BNI4 (0.69); YBR139W (0.681); RAD16 (0.678); YPR127W (0.647); BDH1 (0.632); YDR248C (0.614); GCD11 (0.612); RTC3 (0.612); YLR177W (0.61); LAP2 (0.609); RIB4 (0.593); ADH5 (0.585); YKL071W (0.584); STB5 (0.572); YLR042C (0.571); AIM44 (0.551); HEM2 (0.546)

Homologues (species, bitscore): DHDH (Homo sapiens, 54.7); Dhdh (Mus musculus, 52.0); zgc:101723 (Danio rerio, 50.1); ENSXETP00000013217 (Xenopus tropicalis, 52.0); AT3G20790 (Arabidopsis thaliana, 96.3)

External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser


Comparative analysis of strains

Search table

strain assembly application macro_region gene_coord geneID rnaID protID %id %cov_exon status copyNumber copyID nORFs match_ref_CDS validORF missing_startCodon missing_stopCodon outOfFrame_stopCodon
AKU4011 GCA_001738255.1 Sake Asia CM005307.1:942358-943407:+ gene-YMR315W_AKU4011 rna-NM_001182826.1_AKU4011 cds-NP_014046.1_AKU4011 99.4 100.0 Verified 1 1 1 False True False False False
BG1 GCA_001932575.1 Bioethanol South America MSHP01000069.1:10804-11853:- gene-YMR315W_BG1 rna-NM_001182826.1_BG1 cds-NP_014046.1_BG1 99.9 100.0 Verified 1 1 1 False True False False False
Bruggeman GCA_001738585.1 Bread Not Applicable CM005515.1:887767-888816:+ gene-YMR315W_Bruggeman rna-NM_001182826.1_Bruggeman cds-NP_014046.1_Bruggeman 99.4 100.0 Verified 1 1 1 False True False False False
CAT1 GCA_001738705.1 Bioethanol South America CM005531.1:890332-891381:+ gene-YMR315W_CAT1 rna-NM_001182826.1_CAT1 cds-NP_014046.1_CAT1 99.9 100.0 Verified 1 1 1 False True False False False
CBS1585 GCA_001738375.1 Sake Asia CM005371.1:874611-875660:+ gene-YMR315W_CBS1585 rna-NM_001182826.1_CBS1585 cds-NP_014046.1_CBS1585 99.5 100.0 Verified 1 1 1 False True False False False
CBS436 GCA_001738355.1 Sake Asia CM005355.1:896900-897949:+ gene-YMR315W_CBS436 rna-NM_001182826.1_CBS436 cds-NP_014046.1_CBS436 99.9 100.0 Mismatch 1 1 1 False True False False False
CBS6412 GCA_001738345.1 Sake Asia CM005339.1:985332-986381:+ gene-YMR315W_CBS6412 rna-NM_001182826.1_CBS6412 cds-NP_014046.1_CBS6412 99.5 100.0 Mismatch 1 1 1 False True False False False
CBS6413 GCA_001738265.1 Sake Asia CM005323.1:873732-874781:+ gene-YMR315W_CBS6413 rna-NM_001182826.1_CBS6413 cds-NP_014046.1_CBS6413 99.5 100.0 Verified 1 1 1 False True False False False
CENPK1137D GCA_000269885.1 Laboratory Not Applicable CM001534.1:897360-898409:+ gene-YMR315W_CENPK1137D rna-NM_001182826.1_CENPK1137D cds-NP_014046.1_CENPK1137D 100.0 100.0 Verified 1 1 1 True True False False False
EthanolRed GCA_001738615.1 Bioethanol Asia CM005486.1:934362-935411:+ gene-YMR315W_EthanolRed rna-NM_001182826.1_EthanolRed cds-NP_014046.1_EthanolRed 99.5 100.0 Verified 1 1 1 False True False False False
FaliES1 GCA_001738715.1 Bioethanol Asia CM005547.1:880603-881652:+ gene-YMR315W_FaliES1 rna-NM_001182826.1_FaliES1 cds-NP_014046.1_FaliES1 99.5 100.0 Verified 1 1 1 False True False False False
JAY291 GCA_000182315.2 Bioethanol South America ACFL01000096.1:13355-14404:- gene-YMR315W_JAY291 rna-NM_001182826.1_JAY291 cds-NP_014046.1_JAY291 99.9 100.0 Verified 1 1 1 False True False False False
MUCL30387 GCA_001738515.1 Bread Europe CM005419.1:880880-881929:+ gene-YMR315W_MUCL30387 rna-NM_001182826.1_MUCL30387 cds-NP_014046.1_MUCL30387 99.3 100.0 Verified 1 1 1 False True False False False
MUCL30388 GCA_001738495.1 Bread Europe CM005451.1:890369-891418:+ gene-YMR315W_MUCL30388 rna-NM_001182826.1_MUCL30388 cds-NP_014046.1_MUCL30388 99.4 100.0 Verified 1 1 1 False True False False False
MUCL39482 GCA_001738235.1 Sake Asia CM005291.1:875672-876721:+ gene-YMR315W_MUCL39482 rna-NM_001182826.1_MUCL39482 cds-NP_014046.1_MUCL39482 99.4 100.0 Verified 1 1 1 False True False False False
MUCL42920 GCA_001738485.1 Bread Europe CM005435.1:883983-885032:+ gene-YMR315W_MUCL42920 rna-NM_001182826.1_MUCL42920 cds-NP_014046.1_MUCL42920 99.3 100.0 Verified 1 1 1 False True False False False
NCIM3186 GCA_001029075.1 Bioethanol Asia CP011822.1:902754-903803:+ gene-YMR315W_NCIM3186 rna-NM_001182826.1_NCIM3186 cds-NP_014046.1_NCIM3186 99.4 100.0 Verified 1 1 1 False True False False False
NCYC1407 GCA_001738225.1 Sake Asia CM005275.1:875332-876381:+ gene-YMR315W_NCYC1407 rna-NM_001182826.1_NCYC1407 cds-NP_014046.1_NCYC1407 99.5 100.0 Verified 1 1 1 False True False False False
PE2H3 GCA_905220325.1 Bioethanol South America HG994152.1:890635-891684:+ gene-YMR315W_PE2H3 rna-NM_001182826.1_PE2H3 cds-NP_014046.1_PE2H3 99.9 100.0 Verified 1 1 1 False True False False False
PE2H4 GCA_905220315.1 Bioethanol South America LR999884.1:886618-887667:+ gene-YMR315W_PE2H4 rna-NM_001182826.1_PE2H4 cds-NP_014046.1_PE2H4 99.9 100.0 Verified 1 1 1 False True False False False
S288C GCF_000146045.2 Laboratory Not applicable NC_001145.3:902800-903849:+ gene-YMR315W_S288C rna-NM_001182826.1_S288C cds-NP_014046.1_S288C 100.0 100.0 Verified 1 1 1 True True False False False
SA1 GCA_004114265.1 Bioethanol South America SDIA01000036.1:80594-81643:+ gene-YMR315W_SA1 rna-NM_001182826.1_SA1 cds-NP_014046.1_SA1 99.9 100.0 Verified 1 1 1 False True False False False
ThermosaccDry GCA_001738605.1 Bioethanol Asia CM005499.1:876758-877807:+ gene-YMR315W_ThermosaccDry rna-NM_001182826.1_ThermosaccDry cds-NP_014046.1_ThermosaccDry 99.5 100.0 Verified 1 1 1 False True False False False
VR1 GCA_001738595.1 Bioethanol South America CM005467.1:890487-891536:+ gene-YMR315W_VR1 rna-NM_001182826.1_VR1 cds-NP_014046.1_VR1 99.9 100.0 Verified 1 1 1 False True False False False
ZTW1 GCA_000308935.1 Bioethanol Asia AMDD01000028.1:291974-293023:+ gene-YMR315W_ZTW1 rna-NM_001182826.1_ZTW1 cds-NP_014046.1_ZTW1 99.4 100.0 Verified 1 1 1 False True False False False
Sparadoxus GCF_002079055.1 Not applicable Not applicable NC_047499.1:895425-896474:+ gene-YMR315W_Sparadoxus rna-NM_001182826.1_Sparadoxus cds-NP_014046.1_Sparadoxus 89.4 100.0 Verified 1 1 1 False True False False False

Additional files