YMR254C (YMR254C)

Gene profile

Gene name: YMR254C
Reference locus (S288C): YMR254C
Gene biotype: protein_coding

Description: Uncharacterized protein YMR254C; Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data

Top 10 interactors (score): Unknown

Homologues (species, bitscore): Unknown

External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser

Comparative analysis of strains

Search table

strain assembly application macro_region gene_coord geneID rnaID protID %id %cov_exon status copyNumber copyID nORFs match_ref_CDS validORF missing_startCodon missing_stopCodon outOfFrame_stopCodon
AKU4011 GCA_001738255.1 Sake Asia CM005307.1:817054-817361:- gene-YMR254C_AKU4011 rna-NM_001348870.1_AKU4011 cds-NP_001335809.1_AKU4011 98.3 99.6 Unannotated 1 1 0 False False True False False
BG1 GCA_001932575.1 Bioethanol South America MSHP01000069.1:137043-137351:+ gene-YMR254C_BG1 rna-NM_001348870.1_BG1 cds-NP_001335809.1_BG1 100.0 100.0 Verified 1 1 1 True True False False False
Bruggeman GCA_001738585.1 Bread Not Applicable CM005515.1:762280-762588:- gene-YMR254C_Bruggeman rna-NM_001348870.1_Bruggeman cds-NP_001335809.1_Bruggeman 100.0 100.0 Verified 1 1 1 True True False False False
CAT1 GCA_001738705.1 Bioethanol South America CM005531.1:765303-765611:- gene-YMR254C_CAT1 rna-NM_001348870.1_CAT1 cds-NP_001335809.1_CAT1 100.0 100.0 Verified 1 1 1 True True False False False
CBS1585 GCA_001738375.1 Sake Asia CM005371.1:749303-749610:- gene-YMR254C_CBS1585 rna-NM_001348870.1_CBS1585 cds-NP_001335809.1_CBS1585 98.3 99.6 Unannotated 1 1 0 False False True False False
CBS436 GCA_001738355.1 Sake Asia CM005355.1:754326-754634:- gene-YMR254C_CBS436 rna-NM_001348870.1_CBS436 cds-NP_001335809.1_CBS436 100.0 100.0 Mismatch 1 1 1 True True False False False
CBS6412 GCA_001738345.1 Sake Asia CM005339.1:860867-861174:- gene-YMR254C_CBS6412 rna-NM_001348870.1_CBS6412 cds-NP_001335809.1_CBS6412 98.3 99.6 Unannotated 1 1 0 False False True False False
CBS6413 GCA_001738265.1 Sake Asia CM005323.1:748414-748721:- gene-YMR254C_CBS6413 rna-NM_001348870.1_CBS6413 cds-NP_001335809.1_CBS6413 98.3 99.6 Unannotated 1 1 0 False False True False False
CENPK1137D GCA_000269885.1 Laboratory Not Applicable CM001534.1:771982-772289:- gene-YMR254C_CENPK1137D rna-NM_001348870.1_CENPK1137D cds-NP_001335809.1_CENPK1137D 99.3 99.6 Unannotated 1 1 0 False False True False False
EthanolRed GCA_001738615.1 Bioethanol Asia CM005486.1:809753-810061:- gene-YMR254C_EthanolRed rna-NM_001348870.1_EthanolRed cds-NP_001335809.1_EthanolRed 99.6 100.0 Verified 1 1 0 False False True False False
FaliES1 GCA_001738715.1 Bioethanol Asia CM005547.1:755780-756088:- gene-YMR254C_FaliES1 rna-NM_001348870.1_FaliES1 cds-NP_001335809.1_FaliES1 99.6 100.0 Verified 1 1 0 False False True False False
JAY291 GCA_000182315.2 Bioethanol South America ACFL01000141.1:30439-30747:+ gene-YMR254C_JAY291 rna-NM_001348870.1_JAY291 cds-NP_001335809.1_JAY291 100.0 100.0 Verified 1 1 1 True True False False False
MUCL30387 GCA_001738515.1 Bread Europe CM005419.1:756128-756436:- gene-YMR254C_MUCL30387 rna-NM_001348870.1_MUCL30387 cds-NP_001335809.1_MUCL30387 100.0 100.0 Verified 1 1 1 True True False False False
MUCL30388 GCA_001738495.1 Bread Europe CM005451.1:764721-765029:- gene-YMR254C_MUCL30388 rna-NM_001348870.1_MUCL30388 cds-NP_001335809.1_MUCL30388 100.0 100.0 Verified 1 1 1 True True False False False
MUCL39482 GCA_001738235.1 Sake Asia CM005291.1:750391-750698:- gene-YMR254C_MUCL39482 rna-NM_001348870.1_MUCL39482 cds-NP_001335809.1_MUCL39482 98.3 99.6 Unannotated 1 1 0 False False True False False
MUCL42920 GCA_001738485.1 Bread Europe CM005435.1:758457-758765:- gene-YMR254C_MUCL42920 rna-NM_001348870.1_MUCL42920 cds-NP_001335809.1_MUCL42920 100.0 100.0 Verified 1 1 1 True True False False False
NCIM3186 GCA_001029075.1 Bioethanol Asia CP011822.1:777569-777877:- gene-YMR254C_NCIM3186 rna-NM_001348870.1_NCIM3186 cds-NP_001335809.1_NCIM3186 100.0 100.0 Verified 1 1 1 True True False False False
NCYC1407 GCA_001738225.1 Sake Asia CM005275.1:750024-750331:- gene-YMR254C_NCYC1407 rna-NM_001348870.1_NCYC1407 cds-NP_001335809.1_NCYC1407 98.3 99.6 Unannotated 1 1 0 False False True False False
PE2H3 GCA_905220325.1 Bioethanol South America HG994152.1:760023-760331:- gene-YMR254C_PE2H3 rna-NM_001348870.1_PE2H3 cds-NP_001335809.1_PE2H3 100.0 100.0 Verified 1 1 1 True True False False False
PE2H4 GCA_905220315.1 Bioethanol South America LR999884.1:761068-761376:- gene-YMR254C_PE2H4 rna-NM_001348870.1_PE2H4 cds-NP_001335809.1_PE2H4 100.0 100.0 Verified 1 1 1 True True False False False
S288C GCF_000146045.2 Laboratory Not applicable NC_001145.3:777615-777923:- gene-YMR254C_S288C rna-NM_001348870.1_S288C cds-NP_001335809.1_S288C 100.0 100.0 Verified 1 1 1 True True False False False
SA1 GCA_004114265.1 Bioethanol South America SDIA01000002.1:30515-30823:+ gene-YMR254C_SA1 rna-NM_001348870.1_SA1 cds-NP_001335809.1_SA1 100.0 100.0 Verified 1 1 1 True True False False False
ThermosaccDry GCA_001738605.1 Bioethanol Asia CM005499.1:751949-752257:- gene-YMR254C_ThermosaccDry rna-NM_001348870.1_ThermosaccDry cds-NP_001335809.1_ThermosaccDry 99.6 100.0 Verified 1 1 0 False False True False False
VR1 GCA_001738595.1 Bioethanol South America CM005467.1:764556-764864:- gene-YMR254C_VR1 rna-NM_001348870.1_VR1 cds-NP_001335809.1_VR1 100.0 100.0 Verified 1 1 1 True True False False False
ZTW1 GCA_000308935.1 Bioethanol Asia AMDD01000028.1:167146-167454:- gene-YMR254C_ZTW1 rna-NM_001348870.1_ZTW1 cds-NP_001335809.1_ZTW1 99.6 100.0 Verified 1 1 0 False False True False False

Additional files