YMR244W (YMR244W)


Gene profile

Gene name: YMR244W
Reference locus (S288C): YMR244W
Gene biotype: protein_coding

Description: Uncharacterized protein YMR244W; Putative protein of unknown function; SWAT-GFP fusion protein localizes to the endoplasmic reticulum and vacuole, while mCherry fusion localizes to just the vacuole

Top 10 interactors (score): CTS1 (0.896); BUD4 (0.647); SWI5 (0.585); DSE4 (0.562); ACF2 (0.562); HCM1 (0.463)

Homologues (species, bitscore): Unknown

External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser


Comparative analysis of strains

Search table

strain assembly application macro_region gene_coord geneID rnaID protID %id %cov_exon status copyNumber copyID nORFs match_ref_CDS validORF missing_startCodon missing_stopCodon outOfFrame_stopCodon
AKU4011 GCA_001738255.1 Sake Asia CM005307.1:797120-798187:+ gene-YMR244W_AKU4011 rna-NM_001182752.1_AKU4011 cds-NP_013971.1_AKU4011 98.4 100.0 Verified 1 1 1 False True False False False
BG1 GCA_001932575.1 Bioethanol South America MSHP01000069.1:156369-157436:- gene-YMR244W_BG1 rna-NM_001182752.1_BG1 cds-NP_013971.1_BG1 99.9 100.0 Verified 1 1 1 True True False False False
Bruggeman GCA_001738585.1 Bread Not Applicable CM005515.1:741351-742418:+ gene-YMR244W_Bruggeman rna-NM_001182752.1_Bruggeman cds-NP_013971.1_Bruggeman 99.7 100.0 Verified 1 1 1 False True False False False
CAT1 GCA_001738705.1 Bioethanol South America CM005531.1:745275-746342:+ gene-YMR244W_CAT1 rna-NM_001182752.1_CAT1 cds-NP_013971.1_CAT1 99.8 100.0 Verified 1 1 1 False True False False False
CBS1585 GCA_001738375.1 Sake Asia CM005371.1:729379-730446:+ gene-YMR244W_CBS1585 rna-NM_001182752.1_CBS1585 cds-NP_013971.1_CBS1585 98.4 100.0 Verified 1 1 1 False True False False False
CBS436 GCA_001738355.1 Sake Asia CM005355.1:733658-734725:+ gene-YMR244W_CBS436 rna-NM_001182752.1_CBS436 cds-NP_013971.1_CBS436 99.7 100.0 Mismatch 1 1 1 False True False False False
CBS6412 GCA_001738345.1 Sake Asia CM005339.1:840937-842004:+ gene-YMR244W_CBS6412 rna-NM_001182752.1_CBS6412 cds-NP_013971.1_CBS6412 98.4 100.0 Mismatch 1 1 1 False True False False False
CBS6413 GCA_001738265.1 Sake Asia CM005323.1:728531-729598:+ gene-YMR244W_CBS6413 rna-NM_001182752.1_CBS6413 cds-NP_013971.1_CBS6413 98.4 100.0 Verified 1 1 1 False True False False False
CENPK1137D GCA_000269885.1 Laboratory Not Applicable CM001534.1:751981-753048:+ gene-YMR244W_CENPK1137D rna-NM_001182752.1_CENPK1137D cds-NP_013971.1_CENPK1137D 99.1 100.0 Verified 1 1 1 False True False False False
EthanolRed GCA_001738615.1 Bioethanol Asia CM005486.1:789780-790847:+ gene-YMR244W_EthanolRed rna-NM_001182752.1_EthanolRed cds-NP_013971.1_EthanolRed 98.3 100.0 Verified 1 1 1 False True False False False
FaliES1 GCA_001738715.1 Bioethanol Asia CM005547.1:735804-736871:+ gene-YMR244W_FaliES1 rna-NM_001182752.1_FaliES1 cds-NP_013971.1_FaliES1 98.4 100.0 Verified 1 1 1 False True False False False
JAY291 GCA_000182315.2 Bioethanol South America ACFL01000141.1:49703-50770:- gene-YMR244W_JAY291 rna-NM_001182752.1_JAY291 cds-NP_013971.1_JAY291 99.7 100.0 Verified 1 1 1 False True False False False
MUCL30387 GCA_001738515.1 Bread Europe CM005419.1:735134-736201:+ gene-YMR244W_MUCL30387 rna-NM_001182752.1_MUCL30387 cds-NP_013971.1_MUCL30387 99.8 100.0 Verified 1 1 1 False True False False False
MUCL30388 GCA_001738495.1 Bread Europe CM005451.1:742357-743424:+ gene-YMR244W_MUCL30388 rna-NM_001182752.1_MUCL30388 cds-NP_013971.1_MUCL30388 99.6 100.0 Verified 1 1 1 False True False False False
MUCL39482 GCA_001738235.1 Sake Asia CM005291.1:730449-731516:+ gene-YMR244W_MUCL39482 rna-NM_001182752.1_MUCL39482 cds-NP_013971.1_MUCL39482 98.4 100.0 Verified 1 1 1 False True False False False
MUCL42920 GCA_001738485.1 Bread Europe CM005435.1:737797-738864:+ gene-YMR244W_MUCL42920 rna-NM_001182752.1_MUCL42920 cds-NP_013971.1_MUCL42920 99.7 100.0 Verified 1 1 1 False True False False False
NCIM3186 GCA_001029075.1 Bioethanol Asia CP011822.1:757204-758271:+ gene-YMR244W_NCIM3186 rna-NM_001182752.1_NCIM3186 cds-NP_013971.1_NCIM3186 98.4 100.0 Verified 1 1 1 False True False False False
NCYC1407 GCA_001738225.1 Sake Asia CM005275.1:730105-731172:+ gene-YMR244W_NCYC1407 rna-NM_001182752.1_NCYC1407 cds-NP_013971.1_NCYC1407 98.4 100.0 Verified 1 1 1 False True False False False
PE2H3 GCA_905220325.1 Bioethanol South America HG994152.1:739998-741065:+ gene-YMR244W_PE2H3 rna-NM_001182752.1_PE2H3 cds-NP_013971.1_PE2H3 99.7 100.0 Verified 1 1 1 False True False False False
PE2H4 GCA_905220315.1 Bioethanol South America LR999884.1:741039-742106:+ gene-YMR244W_PE2H4 rna-NM_001182752.1_PE2H4 cds-NP_013971.1_PE2H4 99.9 100.0 Verified 1 1 1 True True False False False
S288C GCF_000146045.2 Laboratory Not applicable NC_001145.3:757250-758317:+ gene-YMR244W_S288C rna-NM_001182752.1_S288C cds-NP_013971.1_S288C 100.0 100.0 Verified 1 1 1 True True False False False
SA1 GCA_004114265.1 Bioethanol South America SDIA01000002.1:49820-50887:- gene-YMR244W_SA1 rna-NM_001182752.1_SA1 cds-NP_013971.1_SA1 99.7 100.0 Verified 1 1 1 False True False False False
ThermosaccDry GCA_001738605.1 Bioethanol Asia CM005499.1:731976-733043:+ gene-YMR244W_ThermosaccDry rna-NM_001182752.1_ThermosaccDry cds-NP_013971.1_ThermosaccDry 98.3 100.0 Verified 1 1 1 False True False False False
VR1 GCA_001738595.1 Bioethanol South America CM005467.1:744531-745598:+ gene-YMR244W_VR1 rna-NM_001182752.1_VR1 cds-NP_013971.1_VR1 99.7 100.0 Verified 1 1 1 False True False False False
ZTW1 GCA_000308935.1 Bioethanol Asia AMDD01000028.1:147111-148178:+ gene-YMR244W_ZTW1 rna-NM_001182752.1_ZTW1 cds-NP_013971.1_ZTW1 99.8 100.0 Verified 1 1 1 False True False False False
Sparadoxus GCF_002079055.1 Not applicable Not applicable NC_047499.1:749830-750888:+ gene-YMR244W_Sparadoxus rna-NM_001182752.1_Sparadoxus cds-NP_013971.1_Sparadoxus 87.3 99.0 Verified 1 1 1 False True False False False

Additional files