Gene name: YMR226C
Reference locus (S288C): YMR226C
Gene biotype: protein_coding
Description: NADP-dependent 3-hydroxy acid dehydrogenase; NADP(+)-dependent serine dehydrogenase and carbonyl reductase; acts on serine, L-allo-threonine, and other 3-hydroxy acids; green fluorescent protein fusion protein localizes to the cytoplasm and nucleus; may interact with ribosomes, based on co-purification experiments
Top 10 interactors (score): GLY1 (0.9); YPR1 (0.809); YGL039W (0.808); GCY1 (0.736); ADH4 (0.732); ARI1 (0.726); FRD1 (0.703); YKL071W (0.676); LEU5 (0.671); YEF1 (0.651); MAE1 (0.638); MRM1 (0.623); FMS1 (0.597); ROK1 (0.577); UTR1 (0.574); ETR1 (0.572); TMA19 (0.571); CPR1 (0.569); UGA2 (0.561); HBN1 (0.56)
Homologues (species, bitscore): DHRS11 (Homo sapiens, 118.2); Dhrs11 (Mus musculus, 119.0); dhrs11a (Danio rerio, 121.3); dhrs11 (Xenopus tropicalis, 114.4); CG7601 (Drosophila melanogaster, 120.6); F28H7.2 (Caenorhabditis elegans, 102.8); AT5G65205 (Arabidopsis thaliana, 102.1)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005307.1:761499-762302:- | gene-YMR226C_AKU4011 | rna-NM_001182733.1_AKU4011 | cds-NP_013953.1_AKU4011 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000069.1:192306-193109:+ | gene-YMR226C_BG1 | rna-NM_001182733.1_BG1 | cds-NP_013953.1_BG1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005515.1:705726-706529:- | gene-YMR226C_Bruggeman | rna-NM_001182733.1_Bruggeman | cds-NP_013953.1_Bruggeman | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005531.1:709601-710404:- | gene-YMR226C_CAT1 | rna-NM_001182733.1_CAT1 | cds-NP_013953.1_CAT1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005371.1:693759-694562:- | gene-YMR226C_CBS1585 | rna-NM_001182733.1_CBS1585 | cds-NP_013953.1_CBS1585 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005355.1:698028-698831:- | gene-YMR226C_CBS436 | rna-NM_001182733.1_CBS436 | cds-NP_013953.1_CBS436 | 100.0 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005339.1:805321-806124:- | gene-YMR226C_CBS6412 | rna-NM_001182733.1_CBS6412 | cds-NP_013953.1_CBS6412 | 99.6 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005323.1:692911-693714:- | gene-YMR226C_CBS6413 | rna-NM_001182733.1_CBS6413 | cds-NP_013953.1_CBS6413 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001534.1:716336-717139:- | gene-YMR226C_CENPK1137D | rna-NM_001182733.1_CENPK1137D | cds-NP_013953.1_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005486.1:753965-754768:- | gene-YMR226C_EthanolRed | rna-NM_001182733.1_EthanolRed | cds-NP_013953.1_EthanolRed | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005547.1:699617-700420:- | gene-YMR226C_FaliES1 | rna-NM_001182733.1_FaliES1 | cds-NP_013953.1_FaliES1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000141.1:85615-86418:+ | gene-YMR226C_JAY291 | rna-NM_001182733.1_JAY291 | cds-NP_013953.1_JAY291 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005419.1:699509-700312:- | gene-YMR226C_MUCL30387 | rna-NM_001182733.1_MUCL30387 | cds-NP_013953.1_MUCL30387 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005451.1:706737-707540:- | gene-YMR226C_MUCL30388 | rna-NM_001182733.1_MUCL30388 | cds-NP_013953.1_MUCL30388 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005291.1:694829-695632:- | gene-YMR226C_MUCL39482 | rna-NM_001182733.1_MUCL39482 | cds-NP_013953.1_MUCL39482 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005435.1:702173-702976:- | gene-YMR226C_MUCL42920 | rna-NM_001182733.1_MUCL42920 | cds-NP_013953.1_MUCL42920 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011822.1:721547-722350:- | gene-YMR226C_NCIM3186 | rna-NM_001182733.1_NCIM3186 | cds-NP_013953.1_NCIM3186 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005275.1:694486-695289:- | gene-YMR226C_NCYC1407 | rna-NM_001182733.1_NCYC1407 | cds-NP_013953.1_NCYC1407 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994152.1:704348-705151:- | gene-YMR226C_PE2H3 | rna-NM_001182733.1_PE2H3 | cds-NP_013953.1_PE2H3 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999884.1:705366-706169:- | gene-YMR226C_PE2H4 | rna-NM_001182733.1_PE2H4 | cds-NP_013953.1_PE2H4 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001145.3:721593-722396:- | gene-YMR226C_S288C | rna-NM_001182733.1_S288C | cds-NP_013953.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000002.1:85730-86533:+ | gene-YMR226C_SA1 | rna-NM_001182733.1_SA1 | cds-NP_013953.1_SA1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005499.1:695788-696591:- | gene-YMR226C_ThermosaccDry | rna-NM_001182733.1_ThermosaccDry | cds-NP_013953.1_ThermosaccDry | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005467.1:708871-709674:- | gene-YMR226C_VR1 | rna-NM_001182733.1_VR1 | cds-NP_013953.1_VR1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000028.1:111493-112296:- | gene-YMR226C_ZTW1 | rna-NM_001182733.1_ZTW1 | cds-NP_013953.1_ZTW1 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047499.1:713733-714536:- | gene-YMR226C_Sparadoxus | rna-NM_001182733.1_Sparadoxus | cds-NP_013953.1_Sparadoxus | 89.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |