YMR187C (YMR187C)

Gene profile

Gene name: YMR187C
Reference locus (S288C): YMR187C
Gene biotype: protein_coding

Description: Uncharacterized protein ymr187c; Putative protein of unknown function; YMR187C is not an essential gene

Top 10 interactors (score): CAM1 (0.404)

Homologues (species, bitscore): Unknown

External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser

Comparative analysis of strains

Search table

strain assembly application macro_region gene_coord geneID rnaID protID %id %cov_exon status copyNumber copyID nORFs match_ref_CDS validORF missing_startCodon missing_stopCodon outOfFrame_stopCodon
AKU4011 GCA_001738255.1 Sake Asia CM005307.1:674621-675916:- gene-YMR187C_AKU4011 rna-NM_001182693.1_AKU4011 cds-NP_013912.1_AKU4011 99.4 100.0 Verified 1 1 1 False True False False False
BG1 GCA_001932575.1 Bioethanol South America MSHP01000069.1:278666-279961:+ gene-YMR187C_BG1 rna-NM_001182693.1_BG1 cds-NP_013912.1_BG1 99.4 100.0 Verified 1 1 1 False True False False False
Bruggeman GCA_001738585.1 Bread Not Applicable CM005515.1:618851-620146:- gene-YMR187C_Bruggeman rna-NM_001182693.1_Bruggeman cds-NP_013912.1_Bruggeman 99.6 100.0 Verified 1 1 1 False True False False False
CAT1 GCA_001738705.1 Bioethanol South America CM005531.1:622094-623389:- gene-YMR187C_CAT1 rna-NM_001182693.1_CAT1 cds-NP_013912.1_CAT1 100.0 100.0 Verified 1 1 1 True True False False False
CBS1585 GCA_001738375.1 Sake Asia CM005371.1:606877-608172:- gene-YMR187C_CBS1585 rna-NM_001182693.1_CBS1585 cds-NP_013912.1_CBS1585 99.4 100.0 Verified 1 1 1 False True False False False
CBS436 GCA_001738355.1 Sake Asia CM005355.1:611140-612435:- gene-YMR187C_CBS436 rna-NM_001182693.1_CBS436 cds-NP_013912.1_CBS436 99.6 100.0 Mismatch 1 1 1 False True False False False
CBS6412 GCA_001738345.1 Sake Asia CM005339.1:718436-719731:- gene-YMR187C_CBS6412 rna-NM_001182693.1_CBS6412 cds-NP_013912.1_CBS6412 99.4 100.0 Mismatch 1 1 1 False True False False False
CBS6413 GCA_001738265.1 Sake Asia CM005323.1:606026-607321:- gene-YMR187C_CBS6413 rna-NM_001182693.1_CBS6413 cds-NP_013912.1_CBS6413 99.4 100.0 Verified 1 1 1 False True False False False
CENPK1137D GCA_000269885.1 Laboratory Not Applicable CM001534.1:629302-630597:- gene-YMR187C_CENPK1137D rna-NM_001182693.1_CENPK1137D cds-NP_013912.1_CENPK1137D 100.0 100.0 Verified 1 1 1 True True False False False
EthanolRed GCA_001738615.1 Bioethanol Asia CM005486.1:667066-668361:- gene-YMR187C_EthanolRed rna-NM_001182693.1_EthanolRed cds-NP_013912.1_EthanolRed 99.2 100.0 Verified 1 1 1 False True False False False
FaliES1 GCA_001738715.1 Bioethanol Asia CM005547.1:612722-614017:- gene-YMR187C_FaliES1 rna-NM_001182693.1_FaliES1 cds-NP_013912.1_FaliES1 99.3 100.0 Verified 1 1 1 False True False False False
JAY291 GCA_000182315.2 Bioethanol South America ACFL01000141.1:171990-173285:+ gene-YMR187C_JAY291 rna-NM_001182693.1_JAY291 cds-NP_013912.1_JAY291 100.0 100.0 Verified 1 1 1 True True False False False
MUCL30387 GCA_001738515.1 Bread Europe CM005419.1:612397-613692:- gene-YMR187C_MUCL30387 rna-NM_001182693.1_MUCL30387 cds-NP_013912.1_MUCL30387 99.6 100.0 Verified 1 1 1 False True False False False
MUCL30388 GCA_001738495.1 Bread Europe CM005451.1:619177-620472:- gene-YMR187C_MUCL30388 rna-NM_001182693.1_MUCL30388 cds-NP_013912.1_MUCL30388 99.6 100.0 Verified 1 1 1 False True False False False
MUCL39482 GCA_001738235.1 Sake Asia CM005291.1:607949-609244:- gene-YMR187C_MUCL39482 rna-NM_001182693.1_MUCL39482 cds-NP_013912.1_MUCL39482 99.4 100.0 Verified 1 1 1 False True False False False
MUCL42920 GCA_001738485.1 Bread Europe CM005435.1:615296-616591:- gene-YMR187C_MUCL42920 rna-NM_001182693.1_MUCL42920 cds-NP_013912.1_MUCL42920 99.6 100.0 Verified 1 1 1 False True False False False
NCIM3186 GCA_001029075.1 Bioethanol Asia CP011822.1:634643-635938:- gene-YMR187C_NCIM3186 rna-NM_001182693.1_NCIM3186 cds-NP_013912.1_NCIM3186 99.6 100.0 Verified 1 1 1 False True False False False
NCYC1407 GCA_001738225.1 Sake Asia CM005275.1:607601-608896:- gene-YMR187C_NCYC1407 rna-NM_001182693.1_NCYC1407 cds-NP_013912.1_NCYC1407 99.4 100.0 Verified 1 1 1 False True False False False
PE2H3 GCA_905220325.1 Bioethanol South America HG994152.1:617484-618779:- gene-YMR187C_PE2H3 rna-NM_001182693.1_PE2H3 cds-NP_013912.1_PE2H3 100.0 100.0 Verified 1 1 1 True True False False False
PE2H4 GCA_905220315.1 Bioethanol South America LR999884.1:618470-619765:- gene-YMR187C_PE2H4 rna-NM_001182693.1_PE2H4 cds-NP_013912.1_PE2H4 100.0 100.0 Verified 1 1 1 True True False False False
S288C GCF_000146045.2 Laboratory Not applicable NC_001145.3:634689-635984:- gene-YMR187C_S288C rna-NM_001182693.1_S288C cds-NP_013912.1_S288C 100.0 100.0 Verified 1 1 1 True True False False False
SA1 GCA_004114265.1 Bioethanol South America SDIA01000002.1:172116-173411:+ gene-YMR187C_SA1 rna-NM_001182693.1_SA1 cds-NP_013912.1_SA1 100.0 100.0 Verified 1 1 1 True True False False False
ThermosaccDry GCA_001738605.1 Bioethanol Asia CM005499.1:608848-610143:- gene-YMR187C_ThermosaccDry rna-NM_001182693.1_ThermosaccDry cds-NP_013912.1_ThermosaccDry 99.3 100.0 Verified 1 1 1 False True False False False
VR1 GCA_001738595.1 Bioethanol South America CM005467.1:622017-623312:- gene-YMR187C_VR1 rna-NM_001182693.1_VR1 cds-NP_013912.1_VR1 100.0 100.0 Verified 1 1 1 True True False False False
ZTW1 GCA_000308935.1 Bioethanol Asia AMDD01000028.1:24636-25931:- gene-YMR187C_ZTW1 rna-NM_001182693.1_ZTW1 cds-NP_013912.1_ZTW1 99.5 100.0 Verified 1 1 1 False True False False False
Sparadoxus GCF_002079055.1 Not applicable Not applicable NC_047499.1:626740-628035:- gene-YMR187C_Sparadoxus rna-NM_001182693.1_Sparadoxus cds-NP_013912.1_Sparadoxus 88.4 100.0 Verified 1 1 1 False True False False False

Additional files