Gene name: YMR181C
Reference locus (S288C): YMR181C
Gene biotype: protein_coding
Description: Uncharacterized protein YMR181C; Protein of unknown function; mRNA transcribed as part of a bicistronic transcript with a predicted transcriptional repressor RGM1/YMR182C; mRNA is destroyed by nonsense-mediated decay (NMD); not an essential gene; YMR181C has a paralog, YPL229W, that arose from the whole genome duplication
Top 10 interactors (score): NCE102 (0.851); GIC1 (0.78); MTC7 (0.779); MSN1 (0.777); BOI1 (0.773); TIF4632 (0.684); RFC5 (0.664); GPR1 (0.65); FLO8 (0.557); MRN1 (0.525); YFL012W (0.523); TIF2 (0.499); ECM21 (0.499); ALY2 (0.499); GMC1 (0.497); TIF1 (0.483); HMS2 (0.483); ATP15 (0.482); RPL41A (0.45); CCR4 (0.404)
Homologues (species, bitscore): Unknown
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005307.1:663558-664022:- | gene-YMR181C_AKU4011 | rna-NM_001182687.1_AKU4011 | cds-NP_013906.1_AKU4011 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000068.1:9113-9577:+ | gene-YMR181C_BG1 | rna-NM_001182687.1_BG1 | cds-NP_013906.1_BG1 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005515.1:607794-608258:- | gene-YMR181C_Bruggeman | rna-NM_001182687.1_Bruggeman | cds-NP_013906.1_Bruggeman | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005531.1:610530-610994:- | gene-YMR181C_CAT1 | rna-NM_001182687.1_CAT1 | cds-NP_013906.1_CAT1 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005371.1:595826-596290:- | gene-YMR181C_CBS1585 | rna-NM_001182687.1_CBS1585 | cds-NP_013906.1_CBS1585 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005355.1:600069-600533:- | gene-YMR181C_CBS436 | rna-NM_001182687.1_CBS436 | cds-NP_013906.1_CBS436 | 100.0 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | MBVQ01000065.1:1445-1909:- | gene-YMR181C_CBS6412 | rna-NM_001182687.1_CBS6412 | cds-NP_013906.1_CBS6412 | 99.7 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005323.1:594966-595430:- | gene-YMR181C_CBS6413 | rna-NM_001182687.1_CBS6413 | cds-NP_013906.1_CBS6413 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001534.1:618162-618626:- | gene-YMR181C_CENPK1137D | rna-NM_001182687.1_CENPK1137D | cds-NP_013906.1_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005486.1:656189-656653:- | gene-YMR181C_EthanolRed | rna-NM_001182687.1_EthanolRed | cds-NP_013906.1_EthanolRed | 99.5 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005547.1:601127-601591:- | gene-YMR181C_FaliES1 | rna-NM_001182687.1_FaliES1 | cds-NP_013906.1_FaliES1 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000265.1:8939-9403:+ | gene-YMR181C_JAY291 | rna-NM_001182687.1_JAY291 | cds-NP_013906.1_JAY291 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005419.1:601340-601804:- | gene-YMR181C_MUCL30387 | rna-NM_001182687.1_MUCL30387 | cds-NP_013906.1_MUCL30387 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005451.1:608120-608584:- | gene-YMR181C_MUCL30388 | rna-NM_001182687.1_MUCL30388 | cds-NP_013906.1_MUCL30388 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005291.1:596876-597340:- | gene-YMR181C_MUCL39482 | rna-NM_001182687.1_MUCL39482 | cds-NP_013906.1_MUCL39482 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005435.1:604239-604703:- | gene-YMR181C_MUCL42920 | rna-NM_001182687.1_MUCL42920 | cds-NP_013906.1_MUCL42920 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011822.1:623570-624034:- | gene-YMR181C_NCIM3186 | rna-NM_001182687.1_NCIM3186 | cds-NP_013906.1_NCIM3186 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005275.1:596533-596997:- | gene-YMR181C_NCYC1407 | rna-NM_001182687.1_NCYC1407 | cds-NP_013906.1_NCYC1407 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994152.1:606405-606869:- | gene-YMR181C_PE2H3 | rna-NM_001182687.1_PE2H3 | cds-NP_013906.1_PE2H3 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999884.1:607391-607855:- | gene-YMR181C_PE2H4 | rna-NM_001182687.1_PE2H4 | cds-NP_013906.1_PE2H4 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001145.3:623616-624080:- | gene-YMR181C_S288C | rna-NM_001182687.1_S288C | cds-NP_013906.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000002.1:184035-184499:+ | gene-YMR181C_SA1 | rna-NM_001182687.1_SA1 | cds-NP_013906.1_SA1 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005499.1:597783-598247:- | gene-YMR181C_ThermosaccDry | rna-NM_001182687.1_ThermosaccDry | cds-NP_013906.1_ThermosaccDry | 99.5 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005467.1:610955-611419:- | gene-YMR181C_VR1 | rna-NM_001182687.1_VR1 | cds-NP_013906.1_VR1 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000028.1:13571-14035:- | gene-YMR181C_ZTW1 | rna-NM_001182687.1_ZTW1 | cds-NP_013906.1_ZTW1 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047499.1:615735-616196:- | gene-YMR181C_Sparadoxus | rna-NM_001182687.1_Sparadoxus | cds-NP_013906.1_Sparadoxus | 92.6 | 99.3 | Verified | 1 | 1 | 1 | False | True | False | False | False |