YMR160W (YMR160W)


Gene profile

Gene name: YMR160W
Reference locus (S288C): YMR160W
Gene biotype: protein_coding

Description: Uncharacterized protein YMR160W; Protein of unknown function; green fluorescent protein (GFP)-fusion protein localizes to the membrane of the vacuole; mutant has enhanced sensitivity to overexpression of mutant huntingtin; YMR160W is not an essential gene; relative distribution within the vacuolar membrane changes upon DNA replication stress

Top 10 interactors (score): Unknown

Homologues (species, bitscore): Unknown

External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser


Comparative analysis of strains

Search table

strain assembly application macro_region gene_coord geneID rnaID protID %id %cov_exon status copyNumber copyID nORFs match_ref_CDS validORF missing_startCodon missing_stopCodon outOfFrame_stopCodon
AKU4011 GCA_001738255.1 Sake Asia CM005307.1:614571-617021:+ gene-YMR160W_AKU4011 rna-NM_001182664.1_AKU4011 cds-NP_013883.1_AKU4011 99.9 100.0 Verified 1 1 1 True True False False False
BG1 GCA_001932575.1 Bioethanol South America MSHP01000068.1:55528-57978:- gene-YMR160W_BG1 rna-NM_001182664.1_BG1 cds-NP_013883.1_BG1 99.7 100.0 Verified 1 1 1 False True False False False
Bruggeman GCA_001738585.1 Bread Not Applicable CM005515.1:557746-560196:+ gene-YMR160W_Bruggeman rna-NM_001182664.1_Bruggeman cds-NP_013883.1_Bruggeman 99.7 100.0 Verified 1 1 1 False True False False False
CAT1 GCA_001738705.1 Bioethanol South America CM005531.1:559953-562403:+ gene-YMR160W_CAT1 rna-NM_001182664.1_CAT1 cds-NP_013883.1_CAT1 99.7 100.0 Verified 1 1 1 False True False False False
CBS1585 GCA_001738375.1 Sake Asia CM005371.1:547496-549946:+ gene-YMR160W_CBS1585 rna-NM_001182664.1_CBS1585 cds-NP_013883.1_CBS1585 99.9 100.0 Verified 1 1 1 True True False False False
CBS436 GCA_001738355.1 Sake Asia CM005355.1:551363-553813:+ gene-YMR160W_CBS436 rna-NM_001182664.1_CBS436 cds-NP_013883.1_CBS436 99.7 100.0 Mismatch 1 1 1 False True False False False
CBS6412 GCA_001738345.1 Sake Asia CM005339.1:660113-662563:+ gene-YMR160W_CBS6412 rna-NM_001182664.1_CBS6412 cds-NP_013883.1_CBS6412 99.9 100.0 Mismatch 1 1 1 True True False False False
CBS6413 GCA_001738265.1 Sake Asia CM005323.1:546046-548496:+ gene-YMR160W_CBS6413 rna-NM_001182664.1_CBS6413 cds-NP_013883.1_CBS6413 99.9 100.0 Verified 1 1 1 True True False False False
CENPK1137D GCA_000269885.1 Laboratory Not Applicable CM001534.1:569569-572019:+ gene-YMR160W_CENPK1137D rna-NM_001182664.1_CENPK1137D cds-NP_013883.1_CENPK1137D 99.8 100.0 Verified 1 1 1 False True False False False
EthanolRed GCA_001738615.1 Bioethanol Asia CM005483.1:545661-548111:+ gene-YMR160W_EthanolRed rna-NM_001182664.1_EthanolRed cds-NP_013883.1_EthanolRed 99.9 100.0 Verified 1 1 1 True True False False False
FaliES1 GCA_001738715.1 Bioethanol Asia CM005547.1:552660-555110:+ gene-YMR160W_FaliES1 rna-NM_001182664.1_FaliES1 cds-NP_013883.1_FaliES1 99.9 100.0 Verified 1 1 1 False True False False False
JAY291 GCA_000182315.2 Bioethanol South America ACFL01000292.1:22423-24873:- gene-YMR160W_JAY291 rna-NM_001182664.1_JAY291 cds-NP_013883.1_JAY291 99.7 100.0 Verified 1 1 1 False True False False False
MUCL30387 GCA_001738515.1 Bread Europe CM005419.1:552456-554906:+ gene-YMR160W_MUCL30387 rna-NM_001182664.1_MUCL30387 cds-NP_013883.1_MUCL30387 99.7 100.0 Verified 1 1 1 False True False False False
MUCL30388 GCA_001738495.1 Bread Europe CM005451.1:557980-560430:+ gene-YMR160W_MUCL30388 rna-NM_001182664.1_MUCL30388 cds-NP_013883.1_MUCL30388 99.7 100.0 Verified 1 1 1 False True False False False
MUCL39482 GCA_001738235.1 Sake Asia CM005291.1:548182-550632:+ gene-YMR160W_MUCL39482 rna-NM_001182664.1_MUCL39482 cds-NP_013883.1_MUCL39482 99.9 100.0 Verified 1 1 1 True True False False False
MUCL42920 GCA_001738485.1 Bread Europe CM005435.1:555052-557502:+ gene-YMR160W_MUCL42920 rna-NM_001182664.1_MUCL42920 cds-NP_013883.1_MUCL42920 99.7 100.0 Verified 1 1 1 False True False False False
NCIM3186 GCA_001029075.1 Bioethanol Asia CP011822.1:575020-577470:+ gene-YMR160W_NCIM3186 rna-NM_001182664.1_NCIM3186 cds-NP_013883.1_NCIM3186 99.6 100.0 Verified 1 1 1 False True False False False
NCYC1407 GCA_001738225.1 Sake Asia CM005275.1:547884-550334:+ gene-YMR160W_NCYC1407 rna-NM_001182664.1_NCYC1407 cds-NP_013883.1_NCYC1407 99.9 100.0 Verified 1 1 1 True True False False False
PE2H3 GCA_905220325.1 Bioethanol South America HG994152.1:558262-560712:+ gene-YMR160W_PE2H3 rna-NM_001182664.1_PE2H3 cds-NP_013883.1_PE2H3 99.7 100.0 Verified 1 1 1 False True False False False
PE2H4 GCA_905220315.1 Bioethanol South America LR999884.1:558712-561162:+ gene-YMR160W_PE2H4 rna-NM_001182664.1_PE2H4 cds-NP_013883.1_PE2H4 99.7 100.0 Verified 1 1 1 False True False False False
S288C GCF_000146045.2 Laboratory Not applicable NC_001145.3:575066-577516:+ gene-YMR160W_S288C rna-NM_001182664.1_S288C cds-NP_013883.1_S288C 100.0 100.0 Verified 1 1 1 True True False False False
SA1 GCA_004114265.1 Bioethanol South America SDIA01000002.1:228919-231369:- gene-YMR160W_SA1 rna-NM_001182664.1_SA1 cds-NP_013883.1_SA1 99.7 100.0 Verified 1 1 1 False True False False False
ThermosaccDry GCA_001738605.1 Bioethanol Asia CM005499.1:548308-550758:+ gene-YMR160W_ThermosaccDry rna-NM_001182664.1_ThermosaccDry cds-NP_013883.1_ThermosaccDry 99.9 100.0 Verified 1 1 1 True True False False False
VR1 GCA_001738595.1 Bioethanol South America CM005467.1:560769-563219:+ gene-YMR160W_VR1 rna-NM_001182664.1_VR1 cds-NP_013883.1_VR1 99.7 100.0 Verified 1 1 1 False True False False False
ZTW1 GCA_000308935.1 Bioethanol Asia AMDD01000027.1:523201-525651:+ gene-YMR160W_ZTW1 rna-NM_001182664.1_ZTW1 cds-NP_013883.1_ZTW1 99.9 100.0 Verified 1 1 1 True True False False False
Sparadoxus GCF_002079055.1 Not applicable Not applicable NC_047499.1:560803-563234:+ gene-YMR160W_Sparadoxus rna-NM_001182664.1_Sparadoxus cds-NP_013883.1_Sparadoxus 88.6 99.2 Verified 1 1 0 False False True False False

Additional files