VEP run statistics
VEP version (API) | 105 (105) |
Annotation sources | Custom: ../FINAL_DATABASE/STRAINS/S288C/GCF_000146045.2/S288C_GCF_000146045.2.sort.gff.gz (overlap) |
Species | homo_sapiens |
Command line options | --custom ../FINAL_DATABASE/STRAINS/S288C/GCF_000146045.2/S288C_GCF_000146045.2.sort.gff.gz,S288C,gff,overlap --fasta ../FINAL_DATABASE/STRAINS/S288C/GCF_000146045.2/S288C_GCF_000146045.2.fa.gz --force_overwrite --fork --input_file ../FINAL_DATABASE/GENES/YMR141C/YMR141C.gene.vcf --output_file ../FINAL_DATABASE/GENES/YMR141C/YMR141C.gene.vep.out |
Start time | 2022-01-07 05:21:36 |
End time | 2022-01-07 05:21:37 |
Run time | 1 seconds |
Input file | ../FINAL_DATABASE/GENES/YMR141C/YMR141C.gene.vcf |
Output file | ../FINAL_DATABASE/GENES/YMR141C/YMR141C.gene.vep.out |
General statistics
Lines of input read | 3 |
Variants processed | 3 |
Variants filtered out | 0 |
Novel / existing variants | - |
Overlapped genes | 9 |
Overlapped transcripts | 9 |
Overlapped regulatory features | - |