YMR114C (YMR114C)


Gene profile

Gene name: YMR114C
Reference locus (S288C): YMR114C
Gene biotype: protein_coding

Description: Putative peptidase YMR114C; Protein of unknown function; may interact with ribosomes, based on co-purification experiments; green fluorescent protein (GFP)-fusion protein localizes to the nucleus and cytoplasm; YMR114C is not an essential gene; Belongs to the SOS response-associated peptidase family

Top 10 interactors (score): CNN1 (0.745); PET18 (0.705); SPO16 (0.697); TPA1 (0.679); YCR087C-A (0.657); OM45 (0.648); DAL5 (0.572); HMO1 (0.571); STT3 (0.543); MSH4 (0.529); DCN1 (0.502); DBP1 (0.476); SYF1 (0.476); BEM2 (0.469); SDH7 (0.467); ECM14 (0.416)

Homologues (species, bitscore): HMCES (Homo sapiens, 90.1); Hmces (Mus musculus, 86.7); hmces (Danio rerio, 95.9); c3orf37 (Xenopus tropicalis, 89.4); CG11986 (Drosophila melanogaster, 112.5); AT2G26470 (Arabidopsis thaliana, 141.4)

External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser


Comparative analysis of strains

Search table

strain assembly application macro_region gene_coord geneID rnaID protID %id %cov_exon status copyNumber copyID nORFs match_ref_CDS validORF missing_startCodon missing_stopCodon outOfFrame_stopCodon
AKU4011 GCA_001738255.1 Sake Asia CM005307.1:534515-535621:- gene-YMR114C_AKU4011 rna-NM_001182614.1_AKU4011 cds-NP_013832.1_AKU4011 98.8 100.0 Verified 1 1 1 False True False False False
BG1 GCA_001932575.1 Bioethanol South America MSHP01000201.1:7227-8333:+ gene-YMR114C_BG1 rna-NM_001182614.1_BG1 cds-NP_013832.1_BG1 99.0 100.0 Verified 1 1 1 False True False False False
Bruggeman GCA_001738585.1 Bread Not Applicable CM005515.1:476701-477807:- gene-YMR114C_Bruggeman rna-NM_001182614.1_Bruggeman cds-NP_013832.1_Bruggeman 99.0 100.0 Verified 1 1 1 False True False False False
CAT1 GCA_001738705.1 Bioethanol South America CM005531.1:477918-479024:- gene-YMR114C_CAT1 rna-NM_001182614.1_CAT1 cds-NP_013832.1_CAT1 99.0 100.0 Verified 1 1 1 False True False False False
CBS1585 GCA_001738375.1 Sake Asia CM005371.1:467958-469064:- gene-YMR114C_CBS1585 rna-NM_001182614.1_CBS1585 cds-NP_013832.1_CBS1585 98.8 100.0 Verified 1 1 1 False True False False False
CBS436 GCA_001738355.1 Sake Asia CM005355.1:472874-473980:- gene-YMR114C_CBS436 rna-NM_001182614.1_CBS436 cds-NP_013832.1_CBS436 99.0 100.0 Mismatch 1 1 1 False True False False False
CBS6412 GCA_001738345.1 Sake Asia CM005339.1:580566-581672:- gene-YMR114C_CBS6412 rna-NM_001182614.1_CBS6412 cds-NP_013832.1_CBS6412 98.8 100.0 Mismatch 1 1 1 False True False False False
CBS6413 GCA_001738265.1 Sake Asia CM005323.1:466719-467825:- gene-YMR114C_CBS6413 rna-NM_001182614.1_CBS6413 cds-NP_013832.1_CBS6413 98.8 100.0 Verified 1 1 1 False True False False False
CENPK1137D GCA_000269885.1 Laboratory Not Applicable CM001534.1:490869-491975:- gene-YMR114C_CENPK1137D rna-NM_001182614.1_CENPK1137D cds-NP_013832.1_CENPK1137D 100.0 100.0 Verified 1 1 1 True True False False False
EthanolRed GCA_001738615.1 Bioethanol Asia CM005483.1:467141-468247:- gene-YMR114C_EthanolRed rna-NM_001182614.1_EthanolRed cds-NP_013832.1_EthanolRed 98.8 100.0 Verified 1 1 1 False True False False False
FaliES1 GCA_001738715.1 Bioethanol Asia CM005547.1:472462-473568:- gene-YMR114C_FaliES1 rna-NM_001182614.1_FaliES1 cds-NP_013832.1_FaliES1 99.0 100.0 Verified 1 1 1 False True False False False
JAY291 GCA_000182315.2 Bioethanol South America ACFL01000380.1:7109-8212:+ gene-YMR114C_JAY291 rna-NM_001182614.1_JAY291 cds-NP_013832.1_JAY291 98.8 99.7 Verified 1 1 1 False True False False False
MUCL30387 GCA_001738515.1 Bread Europe CM005419.1:473621-474727:- gene-YMR114C_MUCL30387 rna-NM_001182614.1_MUCL30387 cds-NP_013832.1_MUCL30387 99.0 100.0 Verified 1 1 1 False True False False False
MUCL30388 GCA_001738495.1 Bread Europe CM005451.1:477872-478978:- gene-YMR114C_MUCL30388 rna-NM_001182614.1_MUCL30388 cds-NP_013832.1_MUCL30388 99.0 100.0 Verified 1 1 1 False True False False False
MUCL39482 GCA_001738235.1 Sake Asia CM005291.1:467759-468865:- gene-YMR114C_MUCL39482 rna-NM_001182614.1_MUCL39482 cds-NP_013832.1_MUCL39482 98.8 100.0 Verified 1 1 1 False True False False False
MUCL42920 GCA_001738485.1 Bread Europe CM005435.1:474775-475881:- gene-YMR114C_MUCL42920 rna-NM_001182614.1_MUCL42920 cds-NP_013832.1_MUCL42920 99.0 100.0 Verified 1 1 1 False True False False False
NCIM3186 GCA_001029075.1 Bioethanol Asia CP011822.1:496297-497403:- gene-YMR114C_NCIM3186 rna-NM_001182614.1_NCIM3186 cds-NP_013832.1_NCIM3186 98.7 100.0 Verified 1 1 1 False True False False False
NCYC1407 GCA_001738225.1 Sake Asia CM005275.1:467655-468761:- gene-YMR114C_NCYC1407 rna-NM_001182614.1_NCYC1407 cds-NP_013832.1_NCYC1407 98.8 100.0 Verified 1 1 1 False True False False False
PE2H3 GCA_905220325.1 Bioethanol South America HG994152.1:473471-474577:- gene-YMR114C_PE2H3 rna-NM_001182614.1_PE2H3 cds-NP_013832.1_PE2H3 99.0 100.0 Verified 1 1 1 False True False False False
PE2H4 GCA_905220315.1 Bioethanol South America LR999884.1:479566-480672:- gene-YMR114C_PE2H4 rna-NM_001182614.1_PE2H4 cds-NP_013832.1_PE2H4 99.0 100.0 Verified 1 1 1 False True False False False
S288C GCF_000146045.2 Laboratory Not applicable NC_001145.3:496343-497449:- gene-YMR114C_S288C rna-NM_001182614.1_S288C cds-NP_013832.1_S288C 100.0 100.0 Verified 1 1 1 True True False False False
SA1 GCA_004114265.1 Bioethanol South America SDIA01000048.1:74159-75265:+ gene-YMR114C_SA1 rna-NM_001182614.1_SA1 cds-NP_013832.1_SA1 99.0 100.0 Verified 1 1 1 False True False False False
ThermosaccDry GCA_001738605.1 Bioethanol Asia CM005499.1:468321-469427:- gene-YMR114C_ThermosaccDry rna-NM_001182614.1_ThermosaccDry cds-NP_013832.1_ThermosaccDry 98.8 100.0 Verified 1 1 1 False True False False False
VR1 GCA_001738595.1 Bioethanol South America CM005467.1:480057-481163:- gene-YMR114C_VR1 rna-NM_001182614.1_VR1 cds-NP_013832.1_VR1 99.0 100.0 Verified 1 1 1 False True False False False
ZTW1 GCA_000308935.1 Bioethanol Asia AMDD01000027.1:444365-445471:- gene-YMR114C_ZTW1 rna-NM_001182614.1_ZTW1 cds-NP_013832.1_ZTW1 99.0 100.0 Verified 1 1 1 False True False False False
Sparadoxus GCF_002079055.1 Not applicable Not applicable NC_047499.1:481367-482473:- gene-YMR114C_Sparadoxus rna-NM_001182614.1_Sparadoxus cds-NP_013832.1_Sparadoxus 86.4 99.5 Verified 1 1 1 False True False False False

Additional files