YMR099C (YMR099C)


Gene profile

Gene name: YMR099C
Reference locus (S288C): YMR099C
Gene biotype: protein_coding

Description: Glucose-6-phosphate 1-epimerase (hexose-6-phosphate mutarotase); likely involved in carbohydrate metabolism; GFP-fusion protein localizes to both the nucleus and cytoplasm and is induced in response to the DNA-damaging agent MMS

Top 10 interactors (score): PGI1 (0.918); PRM15 (0.909); PGM1 (0.904); PGM2 (0.904); HXK1 (0.901); YLR446W (0.901); HXK2 (0.901); EMI2 (0.901); GLK1 (0.901); YLR407W (0.892); TAL1 (0.826); ZWF1 (0.825); TKL1 (0.814); TKL2 (0.814); NQM1 (0.808); FBA1 (0.801); ILV3 (0.791); YGR283C (0.781); NUC1 (0.775); LCL1 (0.768)

Homologues (species, bitscore): CG9008 (Drosophila melanogaster, 161.8); AT4G23730 (Arabidopsis thaliana, 135.6)

External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser


Comparative analysis of strains

Search table

strain assembly application macro_region gene_coord geneID rnaID protID %id %cov_exon status copyNumber copyID nORFs match_ref_CDS validORF missing_startCodon missing_stopCodon outOfFrame_stopCodon
AKU4011 GCA_001738255.1 Sake Asia CM005307.1:501877-502770:- gene-YMR099C_AKU4011 rna-NM_001182599.1_AKU4011 cds-NP_013817.1_AKU4011 99.8 100.0 Verified 1 1 1 True True False False False
BG1 GCA_001932575.1 Bioethanol South America MSHP01000201.1:40245-41138:+ gene-YMR099C_BG1 rna-NM_001182599.1_BG1 cds-NP_013817.1_BG1 100.0 100.0 Verified 1 1 1 True True False False False
Bruggeman GCA_001738585.1 Bread Not Applicable CM005515.1:444304-445197:- gene-YMR099C_Bruggeman rna-NM_001182599.1_Bruggeman cds-NP_013817.1_Bruggeman 99.8 100.0 Verified 1 1 1 True True False False False
CAT1 GCA_001738705.1 Bioethanol South America CM005531.1:444625-445518:- gene-YMR099C_CAT1 rna-NM_001182599.1_CAT1 cds-NP_013817.1_CAT1 99.8 100.0 Verified 1 1 1 True True False False False
CBS1585 GCA_001738375.1 Sake Asia CM005371.1:434823-435716:- gene-YMR099C_CBS1585 rna-NM_001182599.1_CBS1585 cds-NP_013817.1_CBS1585 99.8 100.0 Verified 1 1 1 True True False False False
CBS436 GCA_001738355.1 Sake Asia CM005355.1:440139-441032:- gene-YMR099C_CBS436 rna-NM_001182599.1_CBS436 cds-NP_013817.1_CBS436 99.8 100.0 Mismatch 1 1 1 True True False False False
CBS6412 GCA_001738345.1 Sake Asia CM005339.1:547918-548811:- gene-YMR099C_CBS6412 rna-NM_001182599.1_CBS6412 cds-NP_013817.1_CBS6412 99.8 100.0 Mismatch 1 1 1 True True False False False
CBS6413 GCA_001738265.1 Sake Asia CM005323.1:434080-434973:- gene-YMR099C_CBS6413 rna-NM_001182599.1_CBS6413 cds-NP_013817.1_CBS6413 99.8 100.0 Verified 1 1 1 True True False False False
CENPK1137D GCA_000269885.1 Laboratory Not Applicable CM001534.1:458041-458934:- gene-YMR099C_CENPK1137D rna-NM_001182599.1_CENPK1137D cds-NP_013817.1_CENPK1137D 100.0 100.0 Verified 1 1 1 True True False False False
EthanolRed GCA_001738615.1 Bioethanol Asia CM005483.1:434716-435609:- gene-YMR099C_EthanolRed rna-NM_001182599.1_EthanolRed cds-NP_013817.1_EthanolRed 99.7 100.0 Verified 1 1 1 False True False False False
FaliES1 GCA_001738715.1 Bioethanol Asia CM005547.1:437881-438774:- gene-YMR099C_FaliES1 rna-NM_001182599.1_FaliES1 cds-NP_013817.1_FaliES1 99.8 100.0 Verified 1 1 1 True True False False False
JAY291 GCA_000182315.2 Bioethanol South America ACFL01000349.1:687-1580:- gene-YMR099C_JAY291 rna-NM_001182599.1_JAY291 cds-NP_013817.1_JAY291 100.0 100.0 Verified 1 1 1 True True False False False
MUCL30387 GCA_001738515.1 Bread Europe CM005419.1:441227-442120:- gene-YMR099C_MUCL30387 rna-NM_001182599.1_MUCL30387 cds-NP_013817.1_MUCL30387 99.8 100.0 Verified 1 1 1 True True False False False
MUCL30388 GCA_001738495.1 Bread Europe CM005451.1:445223-446116:- gene-YMR099C_MUCL30388 rna-NM_001182599.1_MUCL30388 cds-NP_013817.1_MUCL30388 99.8 100.0 Verified 1 1 1 True True False False False
MUCL39482 GCA_001738235.1 Sake Asia CM005291.1:435130-436023:- gene-YMR099C_MUCL39482 rna-NM_001182599.1_MUCL39482 cds-NP_013817.1_MUCL39482 99.8 100.0 Verified 1 1 1 True True False False False
MUCL42920 GCA_001738485.1 Bread Europe CM005435.1:441793-442686:- gene-YMR099C_MUCL42920 rna-NM_001182599.1_MUCL42920 cds-NP_013817.1_MUCL42920 99.8 100.0 Verified 1 1 1 True True False False False
NCIM3186 GCA_001029075.1 Bioethanol Asia CP011822.1:463888-464781:- gene-YMR099C_NCIM3186 rna-NM_001182599.1_NCIM3186 cds-NP_013817.1_NCIM3186 99.6 100.0 Verified 1 1 1 False True False False False
NCYC1407 GCA_001738225.1 Sake Asia CM005275.1:435025-435918:- gene-YMR099C_NCYC1407 rna-NM_001182599.1_NCYC1407 cds-NP_013817.1_NCYC1407 99.8 100.0 Verified 1 1 1 True True False False False
PE2H3 GCA_905220325.1 Bioethanol South America HG994152.1:440737-441630:- gene-YMR099C_PE2H3 rna-NM_001182599.1_PE2H3 cds-NP_013817.1_PE2H3 99.8 100.0 Verified 1 1 1 True True False False False
PE2H4 GCA_905220315.1 Bioethanol South America LR999884.1:446832-447725:- gene-YMR099C_PE2H4 rna-NM_001182599.1_PE2H4 cds-NP_013817.1_PE2H4 100.0 100.0 Verified 1 1 1 True True False False False
S288C GCF_000146045.2 Laboratory Not applicable NC_001145.3:463934-464827:- gene-YMR099C_S288C rna-NM_001182599.1_S288C cds-NP_013817.1_S288C 100.0 100.0 Verified 1 1 1 True True False False False
SA1 GCA_004114265.1 Bioethanol South America SDIA01000005.1:85339-86232:+ gene-YMR099C_SA1 rna-NM_001182599.1_SA1 cds-NP_013817.1_SA1 100.0 100.0 Verified 1 1 1 True True False False False
ThermosaccDry GCA_001738605.1 Bioethanol Asia CM005499.1:435684-436577:- gene-YMR099C_ThermosaccDry rna-NM_001182599.1_ThermosaccDry cds-NP_013817.1_ThermosaccDry 99.7 100.0 Verified 1 1 1 False True False False False
VR1 GCA_001738595.1 Bioethanol South America CM005467.1:447323-448216:- gene-YMR099C_VR1 rna-NM_001182599.1_VR1 cds-NP_013817.1_VR1 100.0 100.0 Verified 1 1 1 True True False False False
ZTW1 GCA_000308935.1 Bioethanol Asia AMDD01000027.1:411953-412846:- gene-YMR099C_ZTW1 rna-NM_001182599.1_ZTW1 cds-NP_013817.1_ZTW1 99.8 100.0 Verified 1 1 1 True True False False False
Sparadoxus GCF_002079055.1 Not applicable Not applicable NC_047499.1:448222-449115:- gene-YMR099C_Sparadoxus rna-NM_001182599.1_Sparadoxus cds-NP_013817.1_Sparadoxus 91.4 100.0 Verified 1 1 1 False True False False False

Additional files