Gene name: YMR090W
Reference locus (S288C): YMR090W
Gene biotype: protein_coding
Description: UPF0659 protein YMR090W; Putative protein of unknown function; similar to DTDP-glucose 4,6-dehydratases; GFP-fusion protein localizes to the cytoplasm; up-regulated in response to the fungicide mancozeb; not essential for viability; Belongs to the UPF0659 family
Top 10 interactors (score): MSC1 (0.966); TFS1 (0.927); PRX1 (0.923); GAD1 (0.922); YJR096W (0.922); DCS2 (0.921); ALD3 (0.919); SOL4 (0.919); ECM4 (0.916); YPL245W (0.894); NQM1 (0.893); RTC3 (0.887); DDR2 (0.883); TBF1 (0.87); STF2 (0.864); SYM1 (0.862); RTN2 (0.854); PGM2 (0.837); ARO8 (0.834); GCY1 (0.834)
Homologues (species, bitscore): AT2G34460 (Arabidopsis thaliana, 70.1)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005307.1:487182-487865:+ | gene-YMR090W_AKU4011 | rna-NM_001182590.1_AKU4011 | cds-NP_013808.1_AKU4011 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000201.1:55145-55828:- | gene-YMR090W_BG1 | rna-NM_001182590.1_BG1 | cds-NP_013808.1_BG1 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005515.1:429610-430293:+ | gene-YMR090W_Bruggeman | rna-NM_001182590.1_Bruggeman | cds-NP_013808.1_Bruggeman | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005531.1:429933-430616:+ | gene-YMR090W_CAT1 | rna-NM_001182590.1_CAT1 | cds-NP_013808.1_CAT1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005371.1:420125-420808:+ | gene-YMR090W_CBS1585 | rna-NM_001182590.1_CBS1585 | cds-NP_013808.1_CBS1585 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005355.1:425446-426129:+ | gene-YMR090W_CBS436 | rna-NM_001182590.1_CBS436 | cds-NP_013808.1_CBS436 | 99.4 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005339.1:533221-533904:+ | gene-YMR090W_CBS6412 | rna-NM_001182590.1_CBS6412 | cds-NP_013808.1_CBS6412 | 100.0 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005323.1:419382-420065:+ | gene-YMR090W_CBS6413 | rna-NM_001182590.1_CBS6413 | cds-NP_013808.1_CBS6413 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001534.1:443349-444032:+ | gene-YMR090W_CENPK1137D | rna-NM_001182590.1_CENPK1137D | cds-NP_013808.1_CENPK1137D | 99.2 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005483.1:420016-420699:+ | gene-YMR090W_EthanolRed | rna-NM_001182590.1_EthanolRed | cds-NP_013808.1_EthanolRed | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005547.1:423182-423865:+ | gene-YMR090W_FaliES1 | rna-NM_001182590.1_FaliES1 | cds-NP_013808.1_FaliES1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000033.1:13349-14032:- | gene-YMR090W_JAY291 | rna-NM_001182590.1_JAY291 | cds-NP_013808.1_JAY291 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005419.1:426561-427244:+ | gene-YMR090W_MUCL30387 | rna-NM_001182590.1_MUCL30387 | cds-NP_013808.1_MUCL30387 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005451.1:430524-431207:+ | gene-YMR090W_MUCL30388 | rna-NM_001182590.1_MUCL30388 | cds-NP_013808.1_MUCL30388 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005291.1:420434-421117:+ | gene-YMR090W_MUCL39482 | rna-NM_001182590.1_MUCL39482 | cds-NP_013808.1_MUCL39482 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005435.1:427099-427782:+ | gene-YMR090W_MUCL42920 | rna-NM_001182590.1_MUCL42920 | cds-NP_013808.1_MUCL42920 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011822.1:449199-449882:+ | gene-YMR090W_NCIM3186 | rna-NM_001182590.1_NCIM3186 | cds-NP_013808.1_NCIM3186 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005275.1:420327-421010:+ | gene-YMR090W_NCYC1407 | rna-NM_001182590.1_NCYC1407 | cds-NP_013808.1_NCYC1407 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994152.1:426047-426730:+ | gene-YMR090W_PE2H3 | rna-NM_001182590.1_PE2H3 | cds-NP_013808.1_PE2H3 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999884.1:432142-432825:+ | gene-YMR090W_PE2H4 | rna-NM_001182590.1_PE2H4 | cds-NP_013808.1_PE2H4 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001145.3:449245-449928:+ | gene-YMR090W_S288C | rna-NM_001182590.1_S288C | cds-NP_013808.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000005.1:100239-100922:- | gene-YMR090W_SA1 | rna-NM_001182590.1_SA1 | cds-NP_013808.1_SA1 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005499.1:420985-421668:+ | gene-YMR090W_ThermosaccDry | rna-NM_001182590.1_ThermosaccDry | cds-NP_013808.1_ThermosaccDry | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005467.1:432633-433316:+ | gene-YMR090W_VR1 | rna-NM_001182590.1_VR1 | cds-NP_013808.1_VR1 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000027.1:397255-397938:+ | gene-YMR090W_ZTW1 | rna-NM_001182590.1_ZTW1 | cds-NP_013808.1_ZTW1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047499.1:433709-434392:+ | gene-YMR090W_Sparadoxus | rna-NM_001182590.1_Sparadoxus | cds-NP_013808.1_Sparadoxus | 88.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |